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The map label for this gene is 78049049

Identifier: 78049049

GI number: 78049049

Start: 4002293

End: 4004110

Strand: Reverse

Name: 78049049

Synonym: XCV3493

Alternate gene names: NA

Gene position: 4004110-4002293 (Counterclockwise)

Preceding gene: 78049050

Following gene: 78049048

Centisome position: 77.32

GC content: 67.0

Gene sequence:

>1818_bases
ATGGACGCGCTGACCGAGCTGGCGGGGTGGCTGCAGTCGTTACATCTGTTGCGCCCGACGCTGTTGTGGGCGCTGTTGGC
GATCGTACCGGCGGCTGCGCTGTGGCACTGGCGTCGCCGCGATGCCGACGTCTGGCGGCAAAGCGTGGATGCGCATCTGT
TGCCGAAGCTGTTGGTATCCGGCGGTCGGCGCGGATGGCTGGGATTCGTGCTGGCTGCGCTGACCTATGCGTTGGCCGTG
CTTGCGATGAGCGGGCCGAGCTGGCGGCAGACCGAGCGTCCGGTGTTTCAATCGAGCATGCCGCTGGTAGTGGTGCTGGA
TCTGTCGTCCAGTGCCAACGCAACCGACCTGCCGCCTTCGCGCCTGCTGCAGGCGCGCGCTAAGCTGGCGACGCTGCTGC
GCAAACGTGCCGGTGGCGAGGTGGCATTGCTGGTGTATGCAGGCGAGAGCTTTACGGTTGCGCCATTGACCGAAGACAGT
GCCAACGTGGCCTTGTTTCTGGATGCGCTGTCGCCGTCGGTCATGCCGGTCGATGGCAAGCGTGCCGACCGGGCGATCGA
TGCGGCCGCGCAGTTGTTGCAGCAGGCCGGCTTCAAGCAAGGCGAGATCCTGCTTGTCAGCGATAGCGCAGATCGCTCCG
CCGAAAGTTCGGCGCGGATGGCGCGTTCGCGCGGCTTCAGTGTCTCTGCGCTCGGTGTGGGCGGCGAGCGCGGTGCGGCG
TATCGCACGGCCAGCGGTGAAATTGCGCAGGCCAAGCTCGACGAGGGCAGTCTGCGCACCCTGGCCGCGCAGGGGGGCGG
GCGCTATGCGCGCATTGCGCCGGACGATGCAGACCTGCGGGCGTTGGGCGTGCTCGATCCATCGCAACAGCCGTTGGCCG
ATGAAACCGCCGAGTCCGATGGCGGCAAGAGCTGGCTCGACGAAGGCTATTGGCTGGTGCTGCCGGTGATGCTGCTGTCC
CTGCTGGCGTTTCGTCGCCGCGCGGTGGTGGCCGTGCTGGCGATGGTGTGCGTGCTGCCGCTGGCGCAGCCCGCGCACGC
GGCCGATGGCACCTTGTGGCAGCGTGCCGATCAGGTGCAACAACAGCGCCTGGATGCCGGGGTGCAGGCGTATCGCAAGG
GCGATTTCGCAGCGGCGCAGAAGGCCTTCGAAGCGGTACCGACCGATGAGGGGCTGTACAACCTCGGTAACGCGCTGGCG
CGACAAGGCCAGTACGACGCGGCGATCGCGGCCTACGACCGTGCGCTCAAGCAACATCCGAATCAGCAGGACGCCATCGC
CAATCGCGCGGCGGTCGATGCGGCGCGCAAGCGCCAGCAGCAGAACAACAAGGATGGCAAGGGGCAGTCCAAGGACCTGA
AGCCATCCGGCCAGGATGGGAAGGGGCAACAGCAGGCGGGCCAGAATCAGCAGGACAAGCAATCCGGCCAGGATGGGCAG
AACCAGCACGACAGCAAGAACCAGCCCTCTGAGGGGCAGCCGCCACAGGACGGCAGGCCACAAGATGCGCAGGCCAAGAA
CGGGCAGGGCGAGCAACGCAAGCAGGACACGCCGCCGCAATCTGCCGATGCCAAGGCGCAGCAGCAGGCCGATGAGGCAC
AGCGTCGCAAGATGCAGCAGGCCATGGCGCAGGCGGGCAACAAGCAGGCCGATGCCAGCGGCAAGCAGGAGGCCGCCGTC
GCCGGCGAGACGCCGGAACAACGCGAGCAACGTCAGGCGGTGGACGCATGGCTGCGGCGGGTGCCGGACGATCCGGGCAG
CCTGCTGCGTACCAAATTCAGGCTGGAATACGAACGCAGGCAACGGGACGGACGATGA

Upstream 100 bases:

>100_bases
TGGGGCCTTCGGTGCAGCCGCGCGTCGAGCGTTACTACTGGCCATTGGGCGCGGCAATCGTCGTTGCCCTGTTGGCCTAT
CTGCTGCCGCGGAGGTGGCA

Downstream 100 bases:

>100_bases
TCGGCAGACAGCATTTACGTCGCGCGGCAATCGGCATGCTGGCCAGCGTGGCACTGTTGGCGTGCGCGCCGGTAGGTGCG
GTCACGCGCGCGTGGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat Protein; Von Willebrand Factor Type A; Transmembrane Protein; TPR Domain Protein In Aerotolerance Operon; Tetratricopeptide Repeat Family; Aerotolerance-Related Membrane Protein; Unknwon Proteins; Transmembrane TPR Repeat-Containing Protein; Von Willebrand Factor Type A Domain-Containing Protein; Ssl1 Domain Protein; Von Willebrand Factor Type A Domain Protein; Tetratricopeptide Repeat And VWA Domain-Containing Protein; Tpr Domain Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 605; Mature: 605

Protein sequence:

>605_residues
MDALTELAGWLQSLHLLRPTLLWALLAIVPAAALWHWRRRDADVWRQSVDAHLLPKLLVSGGRRGWLGFVLAALTYALAV
LAMSGPSWRQTERPVFQSSMPLVVVLDLSSSANATDLPPSRLLQARAKLATLLRKRAGGEVALLVYAGESFTVAPLTEDS
ANVALFLDALSPSVMPVDGKRADRAIDAAAQLLQQAGFKQGEILLVSDSADRSAESSARMARSRGFSVSALGVGGERGAA
YRTASGEIAQAKLDEGSLRTLAAQGGGRYARIAPDDADLRALGVLDPSQQPLADETAESDGGKSWLDEGYWLVLPVMLLS
LLAFRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRLDAGVQAYRKGDFAAAQKAFEAVPTDEGLYNLGNALA
RQGQYDAAIAAYDRALKQHPNQQDAIANRAAVDAARKRQQQNNKDGKGQSKDLKPSGQDGKGQQQAGQNQQDKQSGQDGQ
NQHDSKNQPSEGQPPQDGRPQDAQAKNGQGEQRKQDTPPQSADAKAQQQADEAQRRKMQQAMAQAGNKQADASGKQEAAV
AGETPEQREQRQAVDAWLRRVPDDPGSLLRTKFRLEYERRQRDGR

Sequences:

>Translated_605_residues
MDALTELAGWLQSLHLLRPTLLWALLAIVPAAALWHWRRRDADVWRQSVDAHLLPKLLVSGGRRGWLGFVLAALTYALAV
LAMSGPSWRQTERPVFQSSMPLVVVLDLSSSANATDLPPSRLLQARAKLATLLRKRAGGEVALLVYAGESFTVAPLTEDS
ANVALFLDALSPSVMPVDGKRADRAIDAAAQLLQQAGFKQGEILLVSDSADRSAESSARMARSRGFSVSALGVGGERGAA
YRTASGEIAQAKLDEGSLRTLAAQGGGRYARIAPDDADLRALGVLDPSQQPLADETAESDGGKSWLDEGYWLVLPVMLLS
LLAFRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRLDAGVQAYRKGDFAAAQKAFEAVPTDEGLYNLGNALA
RQGQYDAAIAAYDRALKQHPNQQDAIANRAAVDAARKRQQQNNKDGKGQSKDLKPSGQDGKGQQQAGQNQQDKQSGQDGQ
NQHDSKNQPSEGQPPQDGRPQDAQAKNGQGEQRKQDTPPQSADAKAQQQADEAQRRKMQQAMAQAGNKQADASGKQEAAV
AGETPEQREQRQAVDAWLRRVPDDPGSLLRTKFRLEYERRQRDGR
>Mature_605_residues
MDALTELAGWLQSLHLLRPTLLWALLAIVPAAALWHWRRRDADVWRQSVDAHLLPKLLVSGGRRGWLGFVLAALTYALAV
LAMSGPSWRQTERPVFQSSMPLVVVLDLSSSANATDLPPSRLLQARAKLATLLRKRAGGEVALLVYAGESFTVAPLTEDS
ANVALFLDALSPSVMPVDGKRADRAIDAAAQLLQQAGFKQGEILLVSDSADRSAESSARMARSRGFSVSALGVGGERGAA
YRTASGEIAQAKLDEGSLRTLAAQGGGRYARIAPDDADLRALGVLDPSQQPLADETAESDGGKSWLDEGYWLVLPVMLLS
LLAFRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQQQRLDAGVQAYRKGDFAAAQKAFEAVPTDEGLYNLGNALA
RQGQYDAAIAAYDRALKQHPNQQDAIANRAAVDAARKRQQQNNKDGKGQSKDLKPSGQDGKGQQQAGQNQQDKQSGQDGQ
NQHDSKNQPSEGQPPQDGRPQDAQAKNGQGEQRKQDTPPQSADAKAQQQADEAQRRKMQQAMAQAGNKQADASGKQEAAV
AGETPEQREQRQAVDAWLRRVPDDPGSLLRTKFRLEYERRQRDGR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65443; Mature: 65443

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALTELAGWLQSLHLLRPTLLWALLAIVPAAALWHWRRRDADVWRQSVDAHLLPKLLVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GGRRGWLGFVLAALTYALAVLAMSGPSWRQTERPVFQSSMPLVVVLDLSSSANATDLPPS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHH
RLLQARAKLATLLRKRAGGEVALLVYAGESFTVAPLTEDSANVALFLDALSPSVMPVDGK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCC
RADRAIDAAAQLLQQAGFKQGEILLVSDSADRSAESSARMARSRGFSVSALGVGGERGAA
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCE
YRTASGEIAQAKLDEGSLRTLAAQGGGRYARIAPDDADLRALGVLDPSQQPLADETAESD
EECCCCCHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCHHHCCCC
GGKSWLDEGYWLVLPVMLLSLLAFRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQ
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QQRLDAGVQAYRKGDFAAAQKAFEAVPTDEGLYNLGNALARQGQYDAAIAAYDRALKQHP
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
NQQDAIANRAAVDAARKRQQQNNKDGKGQSKDLKPSGQDGKGQQQAGQNQQDKQSGQDGQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCC
NQHDSKNQPSEGQPPQDGRPQDAQAKNGQGEQRKQDTPPQSADAKAQQQADEAQRRKMQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMAQAGNKQADASGKQEAAVAGETPEQREQRQAVDAWLRRVPDDPGSLLRTKFRLEYERR
HHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QRDGR
CCCCC
>Mature Secondary Structure
MDALTELAGWLQSLHLLRPTLLWALLAIVPAAALWHWRRRDADVWRQSVDAHLLPKLLVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
GGRRGWLGFVLAALTYALAVLAMSGPSWRQTERPVFQSSMPLVVVLDLSSSANATDLPPS
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCHH
RLLQARAKLATLLRKRAGGEVALLVYAGESFTVAPLTEDSANVALFLDALSPSVMPVDGK
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCCCCCCC
RADRAIDAAAQLLQQAGFKQGEILLVSDSADRSAESSARMARSRGFSVSALGVGGERGAA
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCE
YRTASGEIAQAKLDEGSLRTLAAQGGGRYARIAPDDADLRALGVLDPSQQPLADETAESD
EECCCCCHHHHHCCCCHHHHHHHCCCCCEEEECCCCCCCEEEECCCCCCCCCCHHHCCCC
GGKSWLDEGYWLVLPVMLLSLLAFRRRAVVAVLAMVCVLPLAQPAHAADGTLWQRADQVQ
CCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
QQRLDAGVQAYRKGDFAAAQKAFEAVPTDEGLYNLGNALARQGQYDAAIAAYDRALKQHP
HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
NQQDAIANRAAVDAARKRQQQNNKDGKGQSKDLKPSGQDGKGQQQAGQNQQDKQSGQDGQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHCCCCCC
NQHDSKNQPSEGQPPQDGRPQDAQAKNGQGEQRKQDTPPQSADAKAQQQADEAQRRKMQQ
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
AMAQAGNKQADASGKQEAAVAGETPEQREQRQAVDAWLRRVPDDPGSLLRTKFRLEYERR
HHHHCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
QRDGR
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA