| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is blaR1
Identifier: 78049036
GI number: 78049036
Start: 3983750
End: 3984208
Strand: Reverse
Name: blaR1
Synonym: XCV3480
Alternate gene names: NA
Gene position: 3984208-3983750 (Counterclockwise)
Preceding gene: 78049037
Following gene: 78049035
Centisome position: 76.94
GC content: 65.14
Gene sequence:
>459_bases ATGCACCTTGAGTTGCCATTGCTGTTGCGCGTCACCTTGTATAGCAGTGCCGCGTTGCTGGCCTGTCTGCTGCTGCGGCG CGTACTGCGTGGCTGGCTGGGCGCAACAGCGGCGTATGCGATCTGGCTCGCCGTGCCACTCGCCGTATTGGCAGCTGCAA TACCAGGGCCGCCGCTCGCGTCAGCGTTGCCGAAGATGCCGGCGATGGTCGCGATGCCGCTCAACCTGCAAGAGGGCGAT CACGCATGGGCGGGGACCTTGATGGCCACCTGGCTGGCCGGTGCGGTCGCGATGACCGTAGCGCTCTGGTGGCGACAACG GCGATTCGTACGCAGCTTGGGCGCGTTGCATGCGCTCGAGGGCGAAGTATGGGCGGCAACCCACGATGTAGGCCTGCCGG TATCGTTGGGGCTCTGGCGCCCACGCATCGTGCTGCCGATGGATTTCGATACGCGCTAA
Upstream 100 bases:
>100_bases GGCGGGCGCGTTGCACCGCTGGTGGCGCACTTCAGCGAACGCGGGCAACTCAGCGCCTCGGACATCGCAGAATTGAAGCG TCTGCTCAAGGAGTTGGACG
Downstream 100 bases:
>100_bases AGCGCCGCCGAACGCACCTTGATCCTGACGCACGAGCGCCTGCATCTGCGGCGCGGCGATCTGTATGCCAATCTGCTGGC CGCGCTGTTGCTGTGCATCG
Product: putative BlaR1 antirepressor (fragment)
Products: NA
Alternate protein names: BlaR1 Antirepressor
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MHLELPLLLRVTLYSSAALLACLLLRRVLRGWLGATAAYAIWLAVPLAVLAAAIPGPPLASALPKMPAMVAMPLNLQEGD HAWAGTLMATWLAGAVAMTVALWWRQRRFVRSLGALHALEGEVWAATHDVGLPVSLGLWRPRIVLPMDFDTR
Sequences:
>Translated_152_residues MHLELPLLLRVTLYSSAALLACLLLRRVLRGWLGATAAYAIWLAVPLAVLAAAIPGPPLASALPKMPAMVAMPLNLQEGD HAWAGTLMATWLAGAVAMTVALWWRQRRFVRSLGALHALEGEVWAATHDVGLPVSLGLWRPRIVLPMDFDTR >Mature_152_residues MHLELPLLLRVTLYSSAALLACLLLRRVLRGWLGATAAYAIWLAVPLAVLAAAIPGPPLASALPKMPAMVAMPLNLQEGD HAWAGTLMATWLAGAVAMTVALWWRQRRFVRSLGALHALEGEVWAATHDVGLPVSLGLWRPRIVLPMDFDTR
Specific function: Unknown
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16517; Mature: 16517
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLELPLLLRVTLYSSAALLACLLLRRVLRGWLGATAAYAIWLAVPLAVLAAAIPGPPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SALPKMPAMVAMPLNLQEGDHAWAGTLMATWLAGAVAMTVALWWRQRRFVRSLGALHALE HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEVWAATHDVGLPVSLGLWRPRIVLPMDFDTR CCEEEEECCCCCCEEECCCCCEEEEECCCCCC >Mature Secondary Structure MHLELPLLLRVTLYSSAALLACLLLRRVLRGWLGATAAYAIWLAVPLAVLAAAIPGPPLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH SALPKMPAMVAMPLNLQEGDHAWAGTLMATWLAGAVAMTVALWWRQRRFVRSLGALHALE HHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GEVWAATHDVGLPVSLGLWRPRIVLPMDFDTR CCEEEEECCCCCCEEECCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA