| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78049022
Identifier: 78049022
GI number: 78049022
Start: 3969502
End: 3970860
Strand: Reverse
Name: 78049022
Synonym: XCV3466
Alternate gene names: NA
Gene position: 3970860-3969502 (Counterclockwise)
Preceding gene: 78049023
Following gene: 78049021
Centisome position: 76.68
GC content: 70.2
Gene sequence:
>1359_bases ATGAACACGATGCGATGGGCACTGCTGCTGATACTGATGCCGCTGCTGGCGCAGGCCGCCGATGTGCGGCAGGACTACCG CCAGCAGTGGCCGCTGCAGGTCACTGGCGCGGATGTCGGCCTCTATCAGGTGAGCTTGGATGCGGCGGTGTATCGCACCG CGCACGACGCGGCGTTGCGCGATGTCACGGTGATCGATGCGCGTGGACAAGAGCTGCCCACCGCCTGGCTGCCGATGGAT GCAGCACCGGCGGCTGCGGTACGCCGTCAGCGCCTGCCCCTGTTTGCGCTGCCGGCCGGTGCCGCGCCGGCCAACGGCGA CCTGCAGTTGATTGCCGAGCGCGACGCCAGTGGTGCGGTGCGCCGCCTGGAAGGTCGCTTTGCGACCGGGGCTGTCGCTG CGGGCCGTGGTGTGAGCTGGCTGATCGATGCCAGCGCGCTGCGCGATCGCCCGCGTGCGCTGGTGCTGGATTGGGAGGGC GACATGCCGGTGCAGGCCCAGGTGCGTGTGGAAGGCAGCGACGATCTGCGCGACTGGCGCGTGCTCGTCTCCAGCGCCAC GATCATGGCGCTGGACAATCAGGCGCAGCGACTGCAGCAGCGTCGTATCGCCCTGGACGATGGTGCGCGTTACTTGCGCC TGGTCACCGCATCGGGCGAGCTGCCGGCATTACGCATGGTCGAGGCGGAGCTGGATGGCGTCGCCATTTCCACACCGCCG CAGTGGCTGGACTTGCCAGGCACCGCAAGAGATGCGGCGCTGGTGTATGCCTTGCCCGGTCGCTTTCCGATCAGCCAACT GGATGTCGGCGGCAGTCAGGCCGAGGCGGTCGAGTGGATCGTGGCAAGTCGCGATAGCGACGATGCGCCGTGGCTGCAAC GTGCCGGCCCCTGGTTGGCGTATCGACTGGGCCAGGGCACGGCAGCCGCGTCGCCGCCGCAACTGCTGACTGCCCCCGTG CGCGATCGCCAATGGCGGTTGGTCGCCGCCCAGGGGCGCAGCACCGCCGTGCCGACGCTGCGCGTCGGGTACCAACCGGA GCGGTTGATGTTTCTCGCCCAGGGCCGGCCGCCATATGCGCTGGTCGCCGGCAGCGCGCGGGCGCAGCGCACCGACGCAC CACTGGGCGCAATGCTGCAGGCACTGCGGCGCGAACGCGGCGCACGGTGGCAGCCGGCGCAGGCCCGCCTGGCTGCGCAG GCACAGCCGCTGGCGGGGGATGCCGCGTTGCAACCGGCCGCCGCGCCGCGCGACTGGAAGCGTTGGCTGCTGTGGGGTCT GTTGGTCGGTGGCGCCTTGCTGGTCGGCGGTTTCGCGGTGAGCCTGTTGCGTAGCGCATCGGCCAATCGCAACGGCTGA
Upstream 100 bases:
>100_bases TGTTGTGCACCGTGGTGGGCTATCTGGCGCCGGCGCCGCCGCGTGCGGTCGCGACCGAAGGTCATGCTGTCCAAGAGAAC GGCGTCGAAGAGGATCAGGC
Downstream 100 bases:
>100_bases TCGCGCCCGCTTCGCATGGCGGTTTGCCGCTGCGGCGCGAAGGTCGGACAATGGGCGTCCCCCGTGACCAAGGCAGCCGT ATTGCCCGTCGTGTTCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNTMRWALLLILMPLLAQAADVRQDYRQQWPLQVTGADVGLYQVSLDAAVYRTAHDAALRDVTVIDARGQELPTAWLPMD AAPAAAVRRQRLPLFALPAGAAPANGDLQLIAERDASGAVRRLEGRFATGAVAAGRGVSWLIDASALRDRPRALVLDWEG DMPVQAQVRVEGSDDLRDWRVLVSSATIMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRMVEAELDGVAISTPP QWLDLPGTARDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDSDDAPWLQRAGPWLAYRLGQGTAAASPPQLLTAPV RDRQWRLVAAQGRSTAVPTLRVGYQPERLMFLAQGRPPYALVAGSARAQRTDAPLGAMLQALRRERGARWQPAQARLAAQ AQPLAGDAALQPAAAPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASANRNG
Sequences:
>Translated_452_residues MNTMRWALLLILMPLLAQAADVRQDYRQQWPLQVTGADVGLYQVSLDAAVYRTAHDAALRDVTVIDARGQELPTAWLPMD AAPAAAVRRQRLPLFALPAGAAPANGDLQLIAERDASGAVRRLEGRFATGAVAAGRGVSWLIDASALRDRPRALVLDWEG DMPVQAQVRVEGSDDLRDWRVLVSSATIMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRMVEAELDGVAISTPP QWLDLPGTARDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDSDDAPWLQRAGPWLAYRLGQGTAAASPPQLLTAPV RDRQWRLVAAQGRSTAVPTLRVGYQPERLMFLAQGRPPYALVAGSARAQRTDAPLGAMLQALRRERGARWQPAQARLAAQ AQPLAGDAALQPAAAPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASANRNG >Mature_452_residues MNTMRWALLLILMPLLAQAADVRQDYRQQWPLQVTGADVGLYQVSLDAAVYRTAHDAALRDVTVIDARGQELPTAWLPMD AAPAAAVRRQRLPLFALPAGAAPANGDLQLIAERDASGAVRRLEGRFATGAVAAGRGVSWLIDASALRDRPRALVLDWEG DMPVQAQVRVEGSDDLRDWRVLVSSATIMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRMVEAELDGVAISTPP QWLDLPGTARDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDSDDAPWLQRAGPWLAYRLGQGTAAASPPQLLTAPV RDRQWRLVAAQGRSTAVPTLRVGYQPERLMFLAQGRPPYALVAGSARAQRTDAPLGAMLQALRRERGARWQPAQARLAAQ AQPLAGDAALQPAAAPRDWKRWLLWGLLVGGALLVGGFAVSLLRSASANRNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48814; Mature: 48814
Theoretical pI: Translated: 10.40; Mature: 10.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTMRWALLLILMPLLAQAADVRQDYRQQWPLQVTGADVGLYQVSLDAAVYRTAHDAALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHC DVTVIDARGQELPTAWLPMDAAPAAAVRRQRLPLFALPAGAAPANGDLQLIAERDASGAV EEEEEECCCCCCCEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCHH RRLEGRFATGAVAAGRGVSWLIDASALRDRPRALVLDWEGDMPVQAQVRVEGSDDLRDWR HHHCCCCCCCEEECCCCCEEEEECHHHCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHH VLVSSATIMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRMVEAELDGVAISTPP HHHHCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEHHCCCEEECCCC QWLDLPGTARDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDSDDAPWLQRAGPWLA CCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHHHHEEEEECCCCCCCCHHHHCCCEEE YRLGQGTAAASPPQLLTAPVRDRQWRLVAAQGRSTAVPTLRVGYQPERLMFLAQGRPPYA EEECCCCCCCCCCHHEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCEE LVAGSARAQRTDAPLGAMLQALRRERGARWQPAQARLAAQAQPLAGDAALQPAAAPRDWK EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHH RWLLWGLLVGGALLVGGFAVSLLRSASANRNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTMRWALLLILMPLLAQAADVRQDYRQQWPLQVTGADVGLYQVSLDAAVYRTAHDAALR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEHHHHHHHHHHHHHC DVTVIDARGQELPTAWLPMDAAPAAAVRRQRLPLFALPAGAAPANGDLQLIAERDASGAV EEEEEECCCCCCCEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCCCHH RRLEGRFATGAVAAGRGVSWLIDASALRDRPRALVLDWEGDMPVQAQVRVEGSDDLRDWR HHHCCCCCCCEEECCCCCEEEEECHHHCCCCCEEEEECCCCCCEEEEEEECCCCCHHHHH VLVSSATIMALDNQAQRLQQRRIALDDGARYLRLVTASGELPALRMVEAELDGVAISTPP HHHHCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEEECCCCCEEEEEEHHCCCEEECCCC QWLDLPGTARDAALVYALPGRFPISQLDVGGSQAEAVEWIVASRDSDDAPWLQRAGPWLA CCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCHHHHHEEEEECCCCCCCCHHHHCCCEEE YRLGQGTAAASPPQLLTAPVRDRQWRLVAAQGRSTAVPTLRVGYQPERLMFLAQGRPPYA EEECCCCCCCCCCHHEECCCCCCEEEEEEECCCCCCCCEEEECCCCCCEEEEECCCCCEE LVAGSARAQRTDAPLGAMLQALRRERGARWQPAQARLAAQAQPLAGDAALQPAAAPRDWK EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHH RWLLWGLLVGGALLVGGFAVSLLRSASANRNG HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA