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The map label for this gene is 78048976

Identifier: 78048976

GI number: 78048976

Start: 3907509

End: 3907850

Strand: Reverse

Name: 78048976

Synonym: XCV3420

Alternate gene names: NA

Gene position: 3907850-3907509 (Counterclockwise)

Preceding gene: 78048984

Following gene: 78048971

Centisome position: 75.46

GC content: 65.2

Gene sequence:

>342_bases
ATGTCGTTGCCATCGCCCACCACGCTTGCCACGTTGACGCAGATTCCCGATGCCGGGTTTCTGGAAGTGGAAGCACTGCT
GGACAGCGGTGCCGAATCGCTGGTGCTGTATCGCGAAGGCACCCAGGTCCGTGCGTGGTTGAATATCTGCCCGCATGCCG
GCCGCCGGCTGGACTGGGCGCCGGGGCAGTTCCTGAAGACCAAGGAAGGCCAGTTGGTCTGCGCCGCGCACGGTGCGGCC
TTCGAACTCAGCGGTGGCGAATGCGTCAGCGGCCCATGCCGCGGCCAATCGCTGTTTGCGGTGCCGGTGCGGGTCGAAGA
TGAGCAGGTGCTGCTGGGGTAA

Upstream 100 bases:

>100_bases
GCAATGGCGTTGTCCCGCAGTCGCCGTCTGAGGCTCCCCGTATTGGCCAGGCGCGCATGCCACAATCCAGGCCCATCGCC
ATCGTTGCCCGGTCCCCTGC

Downstream 100 bases:

>100_bases
GCGCCAGCAACGATTGCCGATGACGCTTTGTCGGCCGCTCGAAAAAAGCGCAACGCCGGATCAGCGCGCCGCCCACCAGA
ACATCAGGTTGATCACCGAT

Product: putative Rieske 2Fe-2S family protein

Products: NA

Alternate protein names: Rieske Domain Protein; Rieske; Rieske Region; Rieske 2Fe-2S Family Protein; Ferredoxin; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MSLPSPTTLATLTQIPDAGFLEVEALLDSGAESLVLYREGTQVRAWLNICPHAGRRLDWAPGQFLKTKEGQLVCAAHGAA
FELSGGECVSGPCRGQSLFAVPVRVEDEQVLLG

Sequences:

>Translated_113_residues
MSLPSPTTLATLTQIPDAGFLEVEALLDSGAESLVLYREGTQVRAWLNICPHAGRRLDWAPGQFLKTKEGQLVCAAHGAA
FELSGGECVSGPCRGQSLFAVPVRVEDEQVLLG
>Mature_112_residues
SLPSPTTLATLTQIPDAGFLEVEALLDSGAESLVLYREGTQVRAWLNICPHAGRRLDWAPGQFLKTKEGQLVCAAHGAAF
ELSGGECVSGPCRGQSLFAVPVRVEDEQVLLG

Specific function: Unknown

COG id: COG2146

COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12022; Mature: 11891

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPSPTTLATLTQIPDAGFLEVEALLDSGAESLVLYREGTQVRAWLNICPHAGRRLDWA
CCCCCCCCEEEEECCCCCCCEEEEEHHCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC
PGQFLKTKEGQLVCAAHGAAFELSGGECVSGPCRGQSLFAVPVRVEDEQVLLG
CCCEEECCCCCEEEEECCCEEEECCCCEECCCCCCCEEEEEEEEECCCEEECC
>Mature Secondary Structure 
SLPSPTTLATLTQIPDAGFLEVEALLDSGAESLVLYREGTQVRAWLNICPHAGRRLDWA
CCCCCCCEEEEECCCCCCCEEEEEHHCCCCCEEEEEECCCEEEEEEEECCCCCCCCCCC
PGQFLKTKEGQLVCAAHGAAFELSGGECVSGPCRGQSLFAVPVRVEDEQVLLG
CCCEEECCCCCEEEEECCCEEEECCCCEECCCCCCCEEEEEEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA