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The map label for this gene is exoI [H]

Identifier: 78048928

GI number: 78048928

Start: 3860123

End: 3860863

Strand: Reverse

Name: exoI [H]

Synonym: XCV3372

Alternate gene names: 78048928

Gene position: 3860863-3860123 (Counterclockwise)

Preceding gene: 78048929

Following gene: 78048927

Centisome position: 74.56

GC content: 61.27

Gene sequence:

>741_bases
GTGGCACTAAGGCAAGACACGCGGAGCGCAGTCTGCCGATTGGAAAGGAAGTGGCTGTTGAAGTTGTTGAAATGCTGGGT
GTTGTCGGTACTGGTGCTTATTGCTTTACCTGTAAGTGCTGCAGAGCTGGTTGGTCGTGCGACGGTGACCGATGGTGACA
CCATCACCGTTGCCCATCAGCGCATCCGCCTGTGGGGCATCGATGCGCCGGAGAGCGCGCAACAGTGCAATGCACACGAT
GGCAGCGCTTGGCCGTGCGGCCGCCGCGCTGCAGCGGCATTGGATGGCTATCTGCTGGACAAGACCGTGCATTGCCAGCC
GAAAGATACCGATCGTTATGGCCGCACGGTCGCCGAATGCTTCGTGCAGGGGCAGTCCGTCAATGCCTGGATGGTGCGCT
CTGGCTGGGCGGTCGCCTATCGTCAATACGCTACCGCGTTCGAGGTAGACGAGCGCCTCGCGCAGCAGCAGCGCCGTAAT
CTCTGGCAGGGCGCGTTTCAGATGCCGGCAGATTACCGCCGCGACAAGAAGGCGCGGACAGCAACCACGCGCCAGGTTGC
AGCATCGGCGCCAAGCAATTGCAGGATCAAGGGCAATATCTCCAGTGACGGCAAGAAGATCTTTCATATGCCGGGCCAGC
GCGATTATGCAAAGACGCGCATCTCGCCGGCGAAGGGCGAGCGCTTCTTCTGTTCGGTGAATGAAGCGGCTGCTGCGGGG
TGGAGACCGGCGCGGCGGTGA

Upstream 100 bases:

>100_bases
CGCGGATGGATTGGCATACAGTGCCCGCCCCTGCGCTGGCATTGGTTGCCGGCGCAGATGTCAGGTTCGATGGAATGCTT
GACCAGGCCGACCGGCTGCA

Downstream 100 bases:

>100_bases
TGGTGTTGCGGCGTACCGAGGCCCGCCGGCCTCCCGGCTTCTGAATTTTCTTGCGCAGAGTCGGGGAGATCCCGATTGAG
CCGGCTCTAGCGCCGCCGCA

Product: nuclease-related protein precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVTDGDTITVAHQRIRLWGIDAPESAQQCNAHD
GSAWPCGRRAAAALDGYLLDKTVHCQPKDTDRYGRTVAECFVQGQSVNAWMVRSGWAVAYRQYATAFEVDERLAQQQRRN
LWQGAFQMPADYRRDKKARTATTRQVAASAPSNCRIKGNISSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAG
WRPARR

Sequences:

>Translated_246_residues
MALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVTDGDTITVAHQRIRLWGIDAPESAQQCNAHD
GSAWPCGRRAAAALDGYLLDKTVHCQPKDTDRYGRTVAECFVQGQSVNAWMVRSGWAVAYRQYATAFEVDERLAQQQRRN
LWQGAFQMPADYRRDKKARTATTRQVAASAPSNCRIKGNISSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAG
WRPARR
>Mature_245_residues
ALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVTDGDTITVAHQRIRLWGIDAPESAQQCNAHDG
SAWPCGRRAAAALDGYLLDKTVHCQPKDTDRYGRTVAECFVQGQSVNAWMVRSGWAVAYRQYATAFEVDERLAQQQRRNL
WQGAFQMPADYRRDKKARTATTRQVAASAPSNCRIKGNISSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAGW
RPARR

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: NA

Molecular weight: Translated: 27524; Mature: 27392

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVTDGDTITVAHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCEEEEEEE
RIRLWGIDAPESAQQCNAHDGSAWPCGRRAAAALDGYLLDKTVHCQPKDTDRYGRTVAEC
EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH
FVQGQSVNAWMVRSGWAVAYRQYATAFEVDERLAQQQRRNLWQGAFQMPADYRRDKKART
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ATTRQVAASAPSNCRIKGNISSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAG
HHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEECCHHHHCC
WRPARR
CCCCCC
>Mature Secondary Structure 
ALRQDTRSAVCRLERKWLLKLLKCWVLSVLVLIALPVSAAELVGRATVTDGDTITVAHQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCCEEEEEEE
RIRLWGIDAPESAQQCNAHDGSAWPCGRRAAAALDGYLLDKTVHCQPKDTDRYGRTVAEC
EEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHH
FVQGQSVNAWMVRSGWAVAYRQYATAFEVDERLAQQQRRNLWQGAFQMPADYRRDKKART
HHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
ATTRQVAASAPSNCRIKGNISSDGKKIFHMPGQRDYAKTRISPAKGERFFCSVNEAAAAG
HHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCCCHHHHCCCCCCCCEEEEECCHHHHCC
WRPARR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8118055; 11481431 [H]