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The map label for this gene is yfiH [C]

Identifier: 78048897

GI number: 78048897

Start: 3826202

End: 3827014

Strand: Reverse

Name: yfiH [C]

Synonym: XCV3341

Alternate gene names: 78048897

Gene position: 3827014-3826202 (Counterclockwise)

Preceding gene: 78048898

Following gene: 78048896

Centisome position: 73.9

GC content: 70.36

Gene sequence:

>813_bases
ATGCCCATGGCTGCGCCCTTCACCCTGCCAGCCGACTGGCCGGCGCCACCGCGCATCCGTGCGCTCACCACGCTGCGTCA
CGGTCTGGGCGGCTCGCTGCCGCCGTTCGACACGCTCAACCTTGGCAACCGCAACAGCGCCGAAGGCGATGTGCCCGAGC
AGGTGGAGCGCAACCGGACACTGCTGGCCGCGGCGCTGCAACTGCCGAGCACGCCGCATTGGTTGCGGCAGGTACACGGC
GTGGATGTGGTACGGGTGGATGCACCGCCCGCTGCACCCGATTCCACCGACCACGCGGCGGATCAGCCGCCAGGTGCGCA
GGAACCGGTTGCCGATGCTGCGGTGACCTCGGCGCCTGGCGTGGTACTGGCAATCCTCACGGCCGATTGCCTGCCGGTCG
TGTTCGCTGCCGTCGATGGCAGCGAGGTCGCTGCTGCGCATGCCGGTTGGCGCGGGCTGGCCGACGGCGTGCTGGAGCGC
AGCGTGGCAGCGATGCGGACGCCACCGCAGCAACTGGTGGCCTGGCTGGGTCCTGCCGCGGGGCCCCAGGTGTATGAGAT
CGGCGAGGACGTGTTCGGCGCCTTCGTTGCGCACGATGCACAGGCGCAACAGGCGTTTGTCGCCACGCGCCCGGGGCACT
GGCGGGTGGATCTGTATGCGCTGGCACGTCAGCGGCTGCAGCGGGCCGGTGTGCCGGCCGCTGCGGTGTATGGCGGCGGG
TTGTGCACCATTTCCGATCCGCAGCGCTTTTTCTCGCATCGCCGCGATCGCCGCAGCGGACGCATGGCCACGCTGGCATG
GATCGCGCCCTGA

Upstream 100 bases:

>100_bases
CCGGTCCGCGCCAGTGCGCCGGTGCCGGCCGATCTGCAGCGCCTGATGACCGTGCTGCGCGAAGACAGCGCACGCGCCGC
CGAGCTGGCACGCCGCTGAG

Downstream 100 bases:

>100_bases
GCGTGCCGCTGTTCGCACAGGTGCTGGGGCAGGACGCGTTCGCGCAACTGCCTGCGCCGGTGCGCGCGCTGCATTCGGTG
CAGCAGCGGCAGACCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MPMAAPFTLPADWPAPPRIRALTTLRHGLGGSLPPFDTLNLGNRNSAEGDVPEQVERNRTLLAAALQLPSTPHWLRQVHG
VDVVRVDAPPAAPDSTDHAADQPPGAQEPVADAAVTSAPGVVLAILTADCLPVVFAAVDGSEVAAAHAGWRGLADGVLER
SVAAMRTPPQQLVAWLGPAAGPQVYEIGEDVFGAFVAHDAQAQQAFVATRPGHWRVDLYALARQRLQRAGVPAAAVYGGG
LCTISDPQRFFSHRRDRRSGRMATLAWIAP

Sequences:

>Translated_270_residues
MPMAAPFTLPADWPAPPRIRALTTLRHGLGGSLPPFDTLNLGNRNSAEGDVPEQVERNRTLLAAALQLPSTPHWLRQVHG
VDVVRVDAPPAAPDSTDHAADQPPGAQEPVADAAVTSAPGVVLAILTADCLPVVFAAVDGSEVAAAHAGWRGLADGVLER
SVAAMRTPPQQLVAWLGPAAGPQVYEIGEDVFGAFVAHDAQAQQAFVATRPGHWRVDLYALARQRLQRAGVPAAAVYGGG
LCTISDPQRFFSHRRDRRSGRMATLAWIAP
>Mature_269_residues
PMAAPFTLPADWPAPPRIRALTTLRHGLGGSLPPFDTLNLGNRNSAEGDVPEQVERNRTLLAAALQLPSTPHWLRQVHGV
DVVRVDAPPAAPDSTDHAADQPPGAQEPVADAAVTSAPGVVLAILTADCLPVVFAAVDGSEVAAAHAGWRGLADGVLERS
VAAMRTPPQQLVAWLGPAAGPQVYEIGEDVFGAFVAHDAQAQQAFVATRPGHWRVDLYALARQRLQRAGVPAAAVYGGGL
CTISDPQRFFSHRRDRRSGRMATLAWIAP

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI190194372, Length=172, Percent_Identity=31.9767441860465, Blast_Score=71, Evalue=9e-13,
Organism=Escherichia coli, GI1788945, Length=256, Percent_Identity=46.09375, Blast_Score=221, Evalue=4e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28541; Mature: 28409

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMAAPFTLPADWPAPPRIRALTTLRHGLGGSLPPFDTLNLGNRNSAEGDVPEQVERNRT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLAAALQLPSTPHWLRQVHGVDVVRVDAPPAAPDSTDHAADQPPGAQEPVADAAVTSAPG
HHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
VVLAILTADCLPVVFAAVDGSEVAAAHAGWRGLADGVLERSVAAMRTPPQQLVAWLGPAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
GPQVYEIGEDVFGAFVAHDAQAQQAFVATRPGHWRVDLYALARQRLQRAGVPAAAVYGGG
CCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCEEHHHHHHHHHHHHHCCCCEEEEECCC
LCTISDPQRFFSHRRDRRSGRMATLAWIAP
EEEECCHHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure 
PMAAPFTLPADWPAPPRIRALTTLRHGLGGSLPPFDTLNLGNRNSAEGDVPEQVERNRT
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LLAAALQLPSTPHWLRQVHGVDVVRVDAPPAAPDSTDHAADQPPGAQEPVADAAVTSAPG
HHHHHHHCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCC
VVLAILTADCLPVVFAAVDGSEVAAAHAGWRGLADGVLERSVAAMRTPPQQLVAWLGPAA
HHHHHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC
GPQVYEIGEDVFGAFVAHDAQAQQAFVATRPGHWRVDLYALARQRLQRAGVPAAAVYGGG
CCHHHHHHHHHHHHHHHCCHHHHHHHEEECCCCEEHHHHHHHHHHHHHCCCCEEEEECCC
LCTISDPQRFFSHRRDRRSGRMATLAWIAP
EEEECCHHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]