| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048887
Identifier: 78048887
GI number: 78048887
Start: 3811170
End: 3812234
Strand: Reverse
Name: 78048887
Synonym: XCV3331
Alternate gene names: NA
Gene position: 3812234-3811170 (Counterclockwise)
Preceding gene: 78048888
Following gene: 78048886
Centisome position: 73.62
GC content: 66.48
Gene sequence:
>1065_bases GTGGTCGCGGCAGCCGGTGGAGGTGTCGTTCTGAGTCCGCTGGCCGGCTTGTGCACCGACAGGTCCGTGCAGTTGCCGAC CGCCACGCTCGCCAGCGTCGATCGGCGTATGTCGCGCGTCTTCATGCATTGGCGGGCATCGCGTGCGCAGCCGGCGAGCG AGTGTCTGCGCACCGCTTCGAGCCAGCTGCGCATGCGCCTTGGCTTCTTGCATTTGTCGCCCGTCCGCGCCGCCCGCGCA CTGTTGGTTGCGATGGCAGGCGGGCTGGCGTTCGGCGCTGCGTCAGACGACACAAGCCTTCGTCTGACGCTGGATGCGCA GACCCGTGCGACCGCCACCTTGGTCGGCCAGCGCCTGCATGTGGTGCTGTCTCCCGGCGATGCCGAACAGTGGTTCGACG CGAATGTGGACGATGGCGAAGGCGACGTGCAGCTGCGCAGCGACGACTACAACTTCGACGGGCGCCCGGATCTTGCGGTG TCGGCGATGCTGGGTCAGGTCAACGAGGCGGTCTGGGTCTTTGTGTTCGATCCTGCACAGCGCCGCTTTCATGCGCTCGC TGCACCGACGCGCCCGGCGGTGCAGTGCGAGGGATTCTTCAATCTGGTTGCCGATCAACAGCAGCGCAGCCTGACCAGTT CCTGCCGCGGTGGGCCGATGTGGTATGCGGATGTCTACCGCTACGACGCTGGCGGGCGGTTGTACGTTTGGCGGACGCAG CAGCGGATCGAGTCGCCGCAGATCCAGGCCTTGCTGGATTCGGGAAGCGAGGATGGGATGCCGCTGTCGGTGTGGCCGAT GTACGACCCGCGCGGCGTCAAGGTGGCAAGCGAAATCGGTACCACGCTCGAGGAACCGATGCCGGTGCAACTGCACGTAC ATGTGAGGCGTTTGCCGCTGTACGCCACGCCGACGGCCACCGTCACCAAACGCTATCTGGTGCGCGGCGATCAGGCCGAT GCGCTGGACGTCAGCGCCGATGGTACGCGGCTGCAGGTGCGTTATCGCAGCGCCGGCCGCAGCGACAGCGTGGGCTGGAT CGAGGTGGATGCGGCGATGCAGTAG
Upstream 100 bases:
>100_bases AGGTGCTGGTGATACTGCACGAGGACACCCCGCAACGGCGCAACGACATCGAAGCGATCCGGCTGGCCTGGAAGCAGGCC ACCGGGCACCAGTCGGTGCT
Downstream 100 bases:
>100_bases CGGGCGATGGCGCCGGGCTGCTTGCTCACGGACAGCCAGACGGCCCCTGGCCACGACACGCTCTGATCCACCGCGCCGCT GTCGTCCCCGCAATGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MVAAAGGGVVLSPLAGLCTDRSVQLPTATLASVDRRMSRVFMHWRASRAQPASECLRTASSQLRMRLGFLHLSPVRAARA LLVAMAGGLAFGAASDDTSLRLTLDAQTRATATLVGQRLHVVLSPGDAEQWFDANVDDGEGDVQLRSDDYNFDGRPDLAV SAMLGQVNEAVWVFVFDPAQRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQ QRIESPQIQALLDSGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVHVRRLPLYATPTATVTKRYLVRGDQAD ALDVSADGTRLQVRYRSAGRSDSVGWIEVDAAMQ
Sequences:
>Translated_354_residues MVAAAGGGVVLSPLAGLCTDRSVQLPTATLASVDRRMSRVFMHWRASRAQPASECLRTASSQLRMRLGFLHLSPVRAARA LLVAMAGGLAFGAASDDTSLRLTLDAQTRATATLVGQRLHVVLSPGDAEQWFDANVDDGEGDVQLRSDDYNFDGRPDLAV SAMLGQVNEAVWVFVFDPAQRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQ QRIESPQIQALLDSGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVHVRRLPLYATPTATVTKRYLVRGDQAD ALDVSADGTRLQVRYRSAGRSDSVGWIEVDAAMQ >Mature_354_residues MVAAAGGGVVLSPLAGLCTDRSVQLPTATLASVDRRMSRVFMHWRASRAQPASECLRTASSQLRMRLGFLHLSPVRAARA LLVAMAGGLAFGAASDDTSLRLTLDAQTRATATLVGQRLHVVLSPGDAEQWFDANVDDGEGDVQLRSDDYNFDGRPDLAV SAMLGQVNEAVWVFVFDPAQRRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQ QRIESPQIQALLDSGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVHVRRLPLYATPTATVTKRYLVRGDQAD ALDVSADGTRLQVRYRSAGRSDSVGWIEVDAAMQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38680; Mature: 38680
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAAAGGGVVLSPLAGLCTDRSVQLPTATLASVDRRMSRVFMHWRASRAQPASECLRTAS CEEECCCCEEHHCHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SQLRMRLGFLHLSPVRAARALLVAMAGGLAFGAASDDTSLRLTLDAQTRATATLVGQRLH HHHHHHHCEEEECHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHHHHCCEEE VVLSPGDAEQWFDANVDDGEGDVQLRSDDYNFDGRPDLAVSAMLGQVNEAVWVFVFDPAQ EEECCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCHH RRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQ HHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECH QRIESPQIQALLDSGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVHVRRLPL HHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHCCHHCCCCCEEEEEEEEEEEE YATPTATVTKRYLVRGDQADALDVSADGTRLQVRYRSAGRSDSVGWIEVDAAMQ EECCCHHHHHHHHEECCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCC >Mature Secondary Structure MVAAAGGGVVLSPLAGLCTDRSVQLPTATLASVDRRMSRVFMHWRASRAQPASECLRTAS CEEECCCCEEHHCHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH SQLRMRLGFLHLSPVRAARALLVAMAGGLAFGAASDDTSLRLTLDAQTRATATLVGQRLH HHHHHHHCEEEECHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCHHHHHHHHCCEEE VVLSPGDAEQWFDANVDDGEGDVQLRSDDYNFDGRPDLAVSAMLGQVNEAVWVFVFDPAQ EEECCCCCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCHH RRFHALAAPTRPAVQCEGFFNLVADQQQRSLTSSCRGGPMWYADVYRYDAGGRLYVWRTQ HHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCEEEEEECH QRIESPQIQALLDSGSEDGMPLSVWPMYDPRGVKVASEIGTTLEEPMPVQLHVHVRRLPL HHCCCCHHHHHHCCCCCCCCCEEEEECCCCCCCEEHHHHCCHHCCCCCEEEEEEEEEEEE YATPTATVTKRYLVRGDQADALDVSADGTRLQVRYRSAGRSDSVGWIEVDAAMQ EECCCHHHHHHHHEECCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA