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The map label for this gene is yebC [C]

Identifier: 78048838

GI number: 78048838

Start: 3748696

End: 3749424

Strand: Reverse

Name: yebC [C]

Synonym: XCV3282

Alternate gene names: 78048838

Gene position: 3749424-3748696 (Counterclockwise)

Preceding gene: 78048839

Following gene: 78048837

Centisome position: 72.4

GC content: 65.98

Gene sequence:

>729_bases
ATGGGTAGAGGTCCCTCGATCGAAGGCCGCAAGAACGCCTCCGACGCCAAGCGCGGCAAGATGTTTACCAAGATCATCCG
CGAGATCAGCGTGGCGGCCCGCGCCGGCGGCGGCGACCCGTCCAATAATCCGCGTCTGCGGACGGCCATGGACAAGGGCC
TGTCGTCGAACATGTCCAAGGACGTGATGGAGCGCGCCATCAAGAAGTCCACCGGCGAGCTGGAAGGGGTGGAATACGAA
GAAGTGCGCTACGAGGGCTACGCGCCCGGCGGCGTGGCGGTGATCGTGGACTGCCTGACCGACAACCGCGTGCGCACCGT
GGCCGACGTGCGCCATGCCTTCAGCAAATGCGGCGGCAACATGGGCACCGAGGGCTCGGTGGCCTTCATGTTCAAGCGCC
TGGGCGTGCTGAGCTTCGCTGCCGGCATCGATGAAGACACCCTCACCGATGCCGCCATCGAAGCCGGCGCCGACGATGTG
GTGGTGTATCCGGAAGACGGCGCCATCGATGTGCTGACCGCCCCGGACGCCTTCGCCCAGGTCAGGGACGCCCTGGTCGC
TGCCGGGCTGGAACCGGCGCACGCCGAAATCACCTTCCGCGCCGACAACGACATCGCCGTGGACGGCGAGACCGCCGTGC
AGGTCCGCAAGCTGCTGGACATGCTCGAAGACCTGGACGACGTACAGGACGTGTATTCGAACGTCGATCAAGCGGCGCTT
GGCGCCTGA

Upstream 100 bases:

>100_bases
TCCAGCGGTGAACATGCGCAGGCGGATGTCGCTGCCCCGGTGAGGGCGGGCAATCAGGTAAAATCCGCGCCCTGTCATTG
AAGCCAGTCTGGAACCACCC

Downstream 100 bases:

>100_bases
GGCGCCGGGAATCGGGAATGGAGAATCGGGAATCGAAACAGCAGCATCCTGCATCGCTCGGCAATGTCGAGCACGCCAGT
AGGCCGCTTTACCCATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSKDVMERAIKKSTGELEGVEYE
EVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDV
VVYPEDGAIDVLTAPDAFAQVRDALVAAGLEPAHAEITFRADNDIAVDGETAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
GA

Sequences:

>Translated_242_residues
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSKDVMERAIKKSTGELEGVEYE
EVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDV
VVYPEDGAIDVLTAPDAFAQVRDALVAAGLEPAHAEITFRADNDIAVDGETAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
GA
>Mature_241_residues
GRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSKDVMERAIKKSTGELEGVEYEE
VRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGNMGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVV
VYPEDGAIDVLTAPDAFAQVRDALVAAGLEPAHAEITFRADNDIAVDGETAVQVRKLLDMLEDLDDVQDVYSNVDQAALG
A

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=233, Percent_Identity=26.1802575107296, Blast_Score=87, Evalue=1e-17,
Organism=Escherichia coli, GI1788171, Length=225, Percent_Identity=58.2222222222222, Blast_Score=263, Evalue=9e-72,
Organism=Escherichia coli, GI1788294, Length=237, Percent_Identity=36.7088607594937, Blast_Score=130, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=31.0606060606061, Blast_Score=102, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24583305, Length=246, Percent_Identity=26.4227642276423, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 25674; Mature: 25543

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHCCHHH
DVMERAIKKSTGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGN
HHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVVVYPEDGAIDVLTAPDAFAQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHH
VRDALVAAGLEPAHAEITFRADNDIAVDGETAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
HHHHHHHHCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GA
CC
>Mature Secondary Structure 
GRGPSIEGRKNASDAKRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCHHCCHHH
DVMERAIKKSTGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKCGGN
HHHHHHHHHCCCCCCCCCHHHHEECCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHHCCC
MGTEGSVAFMFKRLGVLSFAAGIDEDTLTDAAIEAGADDVVVYPEDGAIDVLTAPDAFAQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEEECCCCCEEEEECCHHHHH
VRDALVAAGLEPAHAEITFRADNDIAVDGETAVQVRKLLDMLEDLDDVQDVYSNVDQAAL
HHHHHHHHCCCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA