| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is exsG
Identifier: 78048823
GI number: 78048823
Start: 3734094
End: 3735329
Strand: Reverse
Name: exsG
Synonym: XCV3267
Alternate gene names: NA
Gene position: 3735329-3734094 (Counterclockwise)
Preceding gene: 78048825
Following gene: 78048822
Centisome position: 72.13
GC content: 61.65
Gene sequence:
>1236_bases ATGGCGCAGGGCGACCAGGGACCGGTCTTCGATCCGGCTCCGGTTGGCGCGGGGTTGGCCGGTGCAGGCACGAAACAGTG GAATGCGCTTACGGTATTGGTCGATCGCAACCGCTTTGTCCGGCGACGGCGCGCGTCTTTGTTGAGCTGGATCCGACGTC AAATACGCATGATCAGGCGTTCACGTAAGTCCATTTATCGTTCGCTTCAATTTTGGAACCATGACGCAATGGCCGAGCAT CAGGAAGACGCAGCGAAATCGCGCATTTACGAGGCCCTGCTACAGGCGACACCGGATCTTTTGTATGTGTTCGATATCCA GCATCGCTTCGTCTACGCCAATCAGGCGTTGTTGACGATGTGGGGCATGCGCTGGGAAGACGCCTGCGGCAAAACCTGCC TGGAACTGGGCTACGAGCCCTGGCATGCGGCCATGCACGATGAAGAGATCGAACAGGTGATCGCAACAGGCCAGCCAGTG CGCGGCGAAGTGCCATTCCCGCATACGACCAAGGGCCTGCGCATCTACGACTACATTTTTACCCCGGTGTTCGGACCCGA CGGCAAAGTCGAGGCGATCGCCGGCGCCACGCGCGACATCACCGAACACAAGCAGCATGAGCAGCATCTGCAGCTGTTGA TCAACGAGCTCAACCACCGGGTCAAGAACTCGTTGGTGATGGTGCAATCGTTGGCGCGGCAGTCGTTCACCAACGCCGGT GGCCTGGCCGACGCACAGGAAAAGCTCGACGCGCGTTTGCTGGCGCTGTCGCGGGCACACGACACGCTGACGCGCGAAAA CTGGGTCAGCGCCGACATCCTGGAACTGACCCGCGACGCTGCCGCGCTGTATGAGTCGCACGACAGCCAGCGCTTCACGT TGCAGGGTGATTCCTGTCGGCTTGATCCGCGGCGGGCATTGGCGCTGTCGATGGCGCTGCATGAGCTGTGCACCAACGCG CTCAAGCACGGCGCCTTATCCTTGCCAGCTGGCAATGTGCTGGTTTCGTGGGAGCGCAGCACGCGTGGCGAGCAGGAACT GCTTGAATTGATCTGGCGGGAAACCGGGGGGCCGCCCGTGCAGCCACCCACGCGCAAGGGGTTCGGCACGCGTCTTCTAG AGCGTGGCTTGAAGCACGACCTCAAGGGCGACGTTGAGCTGTCCTTCGATCCGGCTGGCGTGTGCTTCCGCGTTTCCATC CCGTTGCCGCCCGAGCATGCCGAGGCACGGCCATGA
Upstream 100 bases:
>100_bases TGACGGCGGCGGAATCCATGCCACCGGACAACAGAACAACGGCTTTTTTCATGGCGAATCGGCGATCACTGCGGAATAAG CCCGAAGGCTATCAGGGACG
Downstream 100 bases:
>100_bases CCATGCGCGTACTTTTGGTCGAAGACGAATCGTTGGTGGCGATGCTCTTGGAGGATTGCCTGGCGGAACTGGGCTACGAG GTGGTGGCAACCGTGGCCGA
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MAQGDQGPVFDPAPVGAGLAGAGTKQWNALTVLVDRNRFVRRRRASLLSWIRRQIRMIRRSRKSIYRSLQFWNHDAMAEH QEDAAKSRIYEALLQATPDLLYVFDIQHRFVYANQALLTMWGMRWEDACGKTCLELGYEPWHAAMHDEEIEQVIATGQPV RGEVPFPHTTKGLRIYDYIFTPVFGPDGKVEAIAGATRDITEHKQHEQHLQLLINELNHRVKNSLVMVQSLARQSFTNAG GLADAQEKLDARLLALSRAHDTLTRENWVSADILELTRDAAALYESHDSQRFTLQGDSCRLDPRRALALSMALHELCTNA LKHGALSLPAGNVLVSWERSTRGEQELLELIWRETGGPPVQPPTRKGFGTRLLERGLKHDLKGDVELSFDPAGVCFRVSI PLPPEHAEARP
Sequences:
>Translated_411_residues MAQGDQGPVFDPAPVGAGLAGAGTKQWNALTVLVDRNRFVRRRRASLLSWIRRQIRMIRRSRKSIYRSLQFWNHDAMAEH QEDAAKSRIYEALLQATPDLLYVFDIQHRFVYANQALLTMWGMRWEDACGKTCLELGYEPWHAAMHDEEIEQVIATGQPV RGEVPFPHTTKGLRIYDYIFTPVFGPDGKVEAIAGATRDITEHKQHEQHLQLLINELNHRVKNSLVMVQSLARQSFTNAG GLADAQEKLDARLLALSRAHDTLTRENWVSADILELTRDAAALYESHDSQRFTLQGDSCRLDPRRALALSMALHELCTNA LKHGALSLPAGNVLVSWERSTRGEQELLELIWRETGGPPVQPPTRKGFGTRLLERGLKHDLKGDVELSFDPAGVCFRVSI PLPPEHAEARP >Mature_410_residues AQGDQGPVFDPAPVGAGLAGAGTKQWNALTVLVDRNRFVRRRRASLLSWIRRQIRMIRRSRKSIYRSLQFWNHDAMAEHQ EDAAKSRIYEALLQATPDLLYVFDIQHRFVYANQALLTMWGMRWEDACGKTCLELGYEPWHAAMHDEEIEQVIATGQPVR GEVPFPHTTKGLRIYDYIFTPVFGPDGKVEAIAGATRDITEHKQHEQHLQLLINELNHRVKNSLVMVQSLARQSFTNAGG LADAQEKLDARLLALSRAHDTLTRENWVSADILELTRDAAALYESHDSQRFTLQGDSCRLDPRRALALSMALHELCTNAL KHGALSLPAGNVLVSWERSTRGEQELLELIWRETGGPPVQPPTRKGFGTRLLERGLKHDLKGDVELSFDPAGVCFRVSIP LPPEHAEARP
Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]
COG id: COG3920
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR000700 - InterPro: IPR013767 - InterPro: IPR013655 - InterPro: IPR011102 [H]
Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 46349; Mature: 46218
Theoretical pI: Translated: 7.48; Mature: 7.48
Prosite motif: PS50112 PAS ; PS50113 PAC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQGDQGPVFDPAPVGAGLAGAGTKQWNALTVLVDRNRFVRRRRASLLSWIRRQIRMIRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SRKSIYRSLQFWNHDAMAEHQEDAAKSRIYEALLQATPDLLYVFDIQHRFVYANQALLTM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHEECCHHHHHH WGMRWEDACGKTCLELGYEPWHAAMHDEEIEQVIATGQPVRGEVPFPHTTKGLRIYDYIF HCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHC TPVFGPDGKVEAIAGATRDITEHKQHEQHLQLLINELNHRVKNSLVMVQSLARQSFTNAG CCCCCCCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLADAQEKLDARLLALSRAHDTLTRENWVSADILELTRDAAALYESHDSQRFTLQGDSCR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC LDPRRALALSMALHELCTNALKHGALSLPAGNVLVSWERSTRGEQELLELIWRETGGPPV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC QPPTRKGFGTRLLERGLKHDLKGDVELSFDPAGVCFRVSIPLPPEHAEARP CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure AQGDQGPVFDPAPVGAGLAGAGTKQWNALTVLVDRNRFVRRRRASLLSWIRRQIRMIRR CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH SRKSIYRSLQFWNHDAMAEHQEDAAKSRIYEALLQATPDLLYVFDIQHRFVYANQALLTM HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHEECCHHHHHH WGMRWEDACGKTCLELGYEPWHAAMHDEEIEQVIATGQPVRGEVPFPHTTKGLRIYDYIF HCCCHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHC TPVFGPDGKVEAIAGATRDITEHKQHEQHLQLLINELNHRVKNSLVMVQSLARQSFTNAG CCCCCCCCCEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GLADAQEKLDARLLALSRAHDTLTRENWVSADILELTRDAAALYESHDSQRFTLQGDSCR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCC LDPRRALALSMALHELCTNALKHGALSLPAGNVLVSWERSTRGEQELLELIWRETGGPPV CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC QPPTRKGFGTRLLERGLKHDLKGDVELSFDPAGVCFRVSIPLPPEHAEARP CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA