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The map label for this gene is yoaA [C]

Identifier: 78048795

GI number: 78048795

Start: 3695648

End: 3697636

Strand: Reverse

Name: yoaA [C]

Synonym: XCV3239

Alternate gene names: 78048795

Gene position: 3697636-3695648 (Counterclockwise)

Preceding gene: 78048796

Following gene: 78048794

Centisome position: 71.4

GC content: 68.83

Gene sequence:

>1989_bases
ATGTCCCAACTTGCCACTGCCAGCATCGAAGCGCTCAGCGAGGGCGGAGCGCTTGCGCGCCAGCTCGACGCGTTCGCGCC
ACGCGCTGCGCAGTTGCGGCTGACTGGAGCCATCGCCGAAGCGTTCGAACAACGCGATGTGCTGCTGGCAGAGGCCGGCA
CCGGCACCGGCAAGACTTACGCCTACCTGGTGCCGGCCTTGCTGTCCGGGCTCAAGACCATCGTCTCCACCGGCACGCGC
GCGCTGCAGGATCAGCTGTTCCATCGCGACCTGCCGCGCGTGCGCGCAGCGCTGGGCGTGGGGCTGCGCAGTGCGTTGTT
GAAGGGGCGCGCCAACTACCTGTGCAAGTACCGCACCCAGCAGGCGCGTGGCGAACCGCGCTTTGCCGCGCCCGAACAGG
TCTCGCAGTTCCAGCGCATCGTGGCCTGGAGCGGGCGCACCCAGTTCGGCGACATGGCCGAGCTGGAAGCCTTGCCCGGC
GACTCGCCGCTGCTGCCGATGGTGACCTCCACCGTCGACAACTGCCTGGGCACCGACTGCCCGTTCTACGGCGAATGCTT
CGTGGTGCAGGCGCGCCAGCGTGCCCAGGCGGCCGATCTGGTGGTGGTCAATCACCACCTGCTGCTGGCCGATCTGGCGC
TCAAACAGGAAGGTTTCGGCGAAATCCTGCCCGGTGCGCAGGCCTTCGTCATCGACGAGGCGCATCAGTTGCCGGAACTG
GCGGCCAATTTCTTCGGCGAAAGTTTCGGCATGCGGCCATGGCAGGAGCTGGCGCGCGATTGCATGGTCGAAGCGCGCCT
GGTGGCCGGCGCGCAGGCCAGCCTGCAGGCACCGATCCTGGCGCTGGACGAAGCCTTGCGCAGCCTGCGTGCCGGCATGG
AAGGGCTGCCGCCGCGCGGCACGCAATGGCGTGCGCTGGCCAAGCCGCAGGTGCGCGAAGGGTTCGACGCCGTGCTGTCG
TCGCTGGCACGGCTGGGTGAATCCCTGCTGCCGTTGCGTGAGGCCTCACCGGGTTTCGACGGCTGCACGGCACGTGCGCA
GGAAGCGTTGAACCGCCTGTCGCGCTGGCTCGGCGAAGACCAGCCGGTGGCCGATTTCGCGCAGGACCCGCCGGAAGAGG
TGGTCGACAACGATGTGCTCTGGTACGAACTCAGCCCGCGCGGCTTCCGTTGCCAGCGCACGCCGCTGGATGTGTCCGGC
CCGCTGCGCGAACACCGCGAAAAATCGCAGGCGGCCTGGGTATTCACCTCGGCCACGCTGGCGGTGGGCGGCGAGTTCGA
CCACATCGCGCAGCGGCTGGGCTTGAGCGATCCGGTGACATTGCTGCAACCCAGCCCCTTCGATTGGGCGCGCCAGGCCT
TGTGCTACCTGCCGCCGAACCTGCCCGATCCGGCCGCACGCGGGTTCGGCACTGCCTTGATCGGCGCGCTGACGCCGGTG
CTGGAAGCCTCCAACGGCCGTGCGTTCTTGCTGTTTGCCTCGCACCGCGCGCTGCGTGAAGCCGCCGAAGCCCTGCGCGG
CGCGCCGTGGCCGTTGTTCGTGCAGGGCGAGGCGCCGCGCGCGACCTTGCTGCAGCGCTTCCGCGATTCCGGCAATGGCG
TGCTGCTGGGCTCGGCCAGTTTCCGCGAGGGCGTGGACGTGGTGGGCGATGCCTTGAGCGTGGTCGTGATCGACAAGCTG
CCATTCGCCGCACCCGACGACCCGGTGTTCGAAGCGCGCCTGGATGCGATCCGTCGCGAGGGTGGCAACCCATTCCGCGA
CGAGCAGTTGCCGCAGGCGGTGATCGCGCTCAAGCAGGGCGTGGGCCGGCTGATTCGCAGCGAAACCGACCGTGGCGTGC
TGGTGCTGTGCGACCCGCGGCTGGTGAACAAGAGCTACGGCCGCACCTTCATGAAATCGCTGCCGCCGTTTGCGCGCACG
CATGCCATTGCCGATGTGCAGGCGTTTTTCGCGCCGGAACCGGGGGCCCGGGACCGGGCACCCGGGTAA

Upstream 100 bases:

>100_bases
CTGGCGCAGCCGTAGGGATGTGCGCACAAGCCCAACCCAGGCAGCGTCATCGCGCACGCGCTAGGCTGTCGTGCTTCCTG
CCCGCTTTTCGTTCGCTCCC

Downstream 100 bases:

>100_bases
AGGCGTGCGAACCGCTTCCGGCACCCGGGTGGGCGTCGTTGCCGGTTGGTTGGCGGGTGTGCAGCGGTTGTCATCCCAGG
TACCGTGCCGGCCACTCGGA

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MSQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTR
ALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFAAPEQVSQFQRIVAWSGRTQFGDMAELEALPG
DSPLLPMVTSTVDNCLGTDCPFYGECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLS
SLARLGESLLPLREASPGFDGCTARAQEALNRLSRWLGEDQPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKL
PFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFART
HAIADVQAFFAPEPGARDRAPG

Sequences:

>Translated_662_residues
MSQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTR
ALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFAAPEQVSQFQRIVAWSGRTQFGDMAELEALPG
DSPLLPMVTSTVDNCLGTDCPFYGECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLS
SLARLGESLLPLREASPGFDGCTARAQEALNRLSRWLGEDQPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSG
PLREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKL
PFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFART
HAIADVQAFFAPEPGARDRAPG
>Mature_661_residues
SQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLAEAGTGTGKTYAYLVPALLSGLKTIVSTGTRA
LQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQQARGEPRFAAPEQVSQFQRIVAWSGRTQFGDMAELEALPGD
SPLLPMVTSTVDNCLGTDCPFYGECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPELA
ANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRGTQWRALAKPQVREGFDAVLSS
LARLGESLLPLREASPGFDGCTARAQEALNRLSRWLGEDQPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSGP
LREHREKSQAAWVFTSATLAVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPVL
EASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSASFREGVDVVGDALSVVVIDKLP
FAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQGVGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTH
AIADVQAFFAPEPGARDRAPG

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=642, Percent_Identity=43.9252336448598, Blast_Score=503, Evalue=1e-143,
Organism=Escherichia coli, GI1787018, Length=696, Percent_Identity=28.1609195402299, Blast_Score=163, Evalue=3e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935 [H]

Pfam domain/function: PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 71697; Mature: 71566

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLAEAGTGTGKTY
CCCHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEHHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGEPRFAAPEQVSQFQRIVAWSGRTQFGDMAELEALPGDSPLLPMVTSTVDNCLGTDC
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PFYGECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
CCCCCEEEEECHHHCCHHCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCC
TQWRALAKPQVREGFDAVLSSLARLGESLLPLREASPGFDGCTARAQEALNRLSRWLGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSGPLREHREKSQAAWVFTSATL
CCCHHHHCCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHEEEEEEEHH
AVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
EECCCHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSAS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCH
FREGVDVVGDALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
HHHCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFFAPEPGARDRA
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
PG
CC
>Mature Secondary Structure 
SQLATASIEALSEGGALARQLDAFAPRAAQLRLTGAIAEAFEQRDVLLAEAGTGTGKTY
CCHHHHHHHHHHCCCHHHHHHHHHCCCHHHEEHHHHHHHHHHHCCEEEEECCCCCCCHH
AYLVPALLSGLKTIVSTGTRALQDQLFHRDLPRVRAALGVGLRSALLKGRANYLCKYRTQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARGEPRFAAPEQVSQFQRIVAWSGRTQFGDMAELEALPGDSPLLPMVTSTVDNCLGTDC
HHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
PFYGECFVVQARQRAQAADLVVVNHHLLLADLALKQEGFGEILPGAQAFVIDEAHQLPEL
CCCCCEEEEECHHHCCHHCEEEECCHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
AANFFGESFGMRPWQELARDCMVEARLVAGAQASLQAPILALDEALRSLRAGMEGLPPRG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCHHHHHHHHHHHHHCCCCCCCCCC
TQWRALAKPQVREGFDAVLSSLARLGESLLPLREASPGFDGCTARAQEALNRLSRWLGED
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QPVADFAQDPPEEVVDNDVLWYELSPRGFRCQRTPLDVSGPLREHREKSQAAWVFTSATL
CCCHHHHCCCHHHHHCCCEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHEEEEEEEHH
AVGGEFDHIAQRLGLSDPVTLLQPSPFDWARQALCYLPPNLPDPAARGFGTALIGALTPV
EECCCHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LEASNGRAFLLFASHRALREAAEALRGAPWPLFVQGEAPRATLLQRFRDSGNGVLLGSAS
HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHCCCCEEEEECCH
FREGVDVVGDALSVVVIDKLPFAAPDDPVFEARLDAIRREGGNPFRDEQLPQAVIALKQG
HHHCHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VGRLIRSETDRGVLVLCDPRLVNKSYGRTFMKSLPPFARTHAIADVQAFFAPEPGARDRA
HHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
PG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]