| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048784
Identifier: 78048784
GI number: 78048784
Start: 3679268
End: 3680476
Strand: Reverse
Name: 78048784
Synonym: XCV3228
Alternate gene names: NA
Gene position: 3680476-3679268 (Counterclockwise)
Preceding gene: 78048785
Following gene: 78048783
Centisome position: 71.07
GC content: 70.89
Gene sequence:
>1209_bases GTGTCCGAGACTAATGGCGCAATGGGAACTCCGGTTGCTTTGCTGGGTCGTCCCGGTCAGGCGCGCGAGCGCCTGCGCGA GGCGCTTGGCCTGGCCGGCGCGCAGGTGGTGCTGGAAGACGAGCCAGCGGCGGTCGACGTGCAGATGCTGCGCGACGCCG AGCCGGTGGCCGTGCTGGTCGCACTCGAACCGTCGATCGAAGACGCGCTCGAAGCGCTGGAGCCGGCCTTCAACATGCCC GGCGTCACCGTGATCTTCGACGAGGCCGAACTGACGGTGCGCCGCGAGGGCTGGGAAGCGCAGCGCTGGGTGCGCCATCT GGCCGCCAAGCTACACGGCCACGCCGACGTGCTGCCGCCGGGCACCGAAAGCGAGCCCTCGCTGCAGCCCGAGCCCGGCC TGACGCTGGCACCGCAGCAGCATTCGGACCTGCAACTGGATCAACACCTGGAAGCGGCCGCGCACGCGTTCGACAGCGTG CCCGGCGATGCCTTGTTCGCGCATGCCTCCATGCAGGAGGCGGCACCGGCCGCTGTGGAAAAGCCGGGGCTGGCGCTGGG CGATTCCAGCACCTGGGGCCTGGTGGACGAGGTGGCCGTGGTGGTGCGCCCGCGCGCCGAACCCGATGTGGCGGCCCTGT CCACCGGCGGCTTGTCGCTGGTGGATCTGGAGCACAACGGCAGCGTCACCGGCGCTGTGCTGGTCGTCGCTGGCATCGGT GGGCCGGATGCGATCCGTCGCCTGCTGGCCGCCTTGCCGCCGGAATTCCCGCGTGCGGTGCTGGTGCGCATGACCCTGGA TGGCGGCCAGTACGGCAACTTGGTGCGGCAGATGGGGCGCGTGTCTGCGTTGCCGGTCGAACTGGGTGAAGCGGGGCAGG TGGTCGCACCAGGCAAGGTGTATGTGCTCTCCGACGAGGTCGGCGTGCAACAGCATGCCGGCGCGCTGGCGTTCGTGGCA CCGGCCGATCCGGCCGGGCTGATCGGCGCGCTGCCGCCGGCCGACAGTGCGGTGCTGATGCTCAGCGGTGCCAACGAGGC GCTGGTGGAGGCATCGCTGGCATTGGCCGAGCAAGGCGGCTGGTTGGCCGGGCAATCCACCGACGGCTGTTACGACCCGG CCGCCGCCGCGCGTCTGGCGCGGCAAGGCATTCTGACCGGCGACCCTGCGCAGTTGGCGCAGGCGCTGGCGCAGCGTTGG CCGGCATAA
Upstream 100 bases:
>100_bases CGCCAGCGCGCCTTCGAGATCGGCGTGCAGCGTTACCTGGGCAAGCCTTACCAAGAGTTGGATCTGATGCGAAACGTGTA TGACCTGCTGGGGATCGCCC
Downstream 100 bases:
>100_bases GCCGGGCGCTCCCATTCGAATCGGAATCATGCGATGAGCTACGCCAATAACGACGAAATCCGCGGCGTCCTGATCCAGGC CGGTAGCGAGCGCGTGCTGC
Product: hypothetical protein
Products: protein L-glutamate; methanol
Alternate protein names: Chemotaxis-Related Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSETNGAMGTPVALLGRPGQARERLREALGLAGAQVVLEDEPAAVDVQMLRDAEPVAVLVALEPSIEDALEALEPAFNMP GVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLTLAPQQHSDLQLDQHLEAAAHAFDSV PGDALFAHASMQEAAPAAVEKPGLALGDSSTWGLVDEVAVVVRPRAEPDVAALSTGGLSLVDLEHNGSVTGAVLVVAGIG GPDAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVAPGKVYVLSDEVGVQQHAGALAFVA PADPAGLIGALPPADSAVLMLSGANEALVEASLALAEQGGWLAGQSTDGCYDPAAAARLARQGILTGDPAQLAQALAQRW PA
Sequences:
>Translated_402_residues MSETNGAMGTPVALLGRPGQARERLREALGLAGAQVVLEDEPAAVDVQMLRDAEPVAVLVALEPSIEDALEALEPAFNMP GVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLTLAPQQHSDLQLDQHLEAAAHAFDSV PGDALFAHASMQEAAPAAVEKPGLALGDSSTWGLVDEVAVVVRPRAEPDVAALSTGGLSLVDLEHNGSVTGAVLVVAGIG GPDAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVAPGKVYVLSDEVGVQQHAGALAFVA PADPAGLIGALPPADSAVLMLSGANEALVEASLALAEQGGWLAGQSTDGCYDPAAAARLARQGILTGDPAQLAQALAQRW PA >Mature_401_residues SETNGAMGTPVALLGRPGQARERLREALGLAGAQVVLEDEPAAVDVQMLRDAEPVAVLVALEPSIEDALEALEPAFNMPG VTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPPGTESEPSLQPEPGLTLAPQQHSDLQLDQHLEAAAHAFDSVP GDALFAHASMQEAAPAAVEKPGLALGDSSTWGLVDEVAVVVRPRAEPDVAALSTGGLSLVDLEHNGSVTGAVLVVAGIGG PDAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVAPGKVYVLSDEVGVQQHAGALAFVAP ADPAGLIGALPPADSAVLMLSGANEALVEASLALAEQGGWLAGQSTDGCYDPAAAARLARQGILTGDPAQLAQALAQRWP A
Specific function: Unknown
COG id: COG2201
COG function: function code NT; Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.61
Molecular weight: Translated: 41461; Mature: 41330
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50122 CHEB
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETNGAMGTPVALLGRPGQARERLREALGLAGAQVVLEDEPAAVDVQMLRDAEPVAVLV CCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHCCCCCEEEEE ALEPSIEDALEALEPAFNMPGVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPP EECCCHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC GTESEPSLQPEPGLTLAPQQHSDLQLDQHLEAAAHAFDSVPGDALFAHASMQEAAPAAVE CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCHHC KPGLALGDSSTWGLVDEVAVVVRPRAEPDVAALSTGGLSLVDLEHNGSVTGAVLVVAGIG CCCCEECCCCCCCHHHHHHEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEEEEECC GPDAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVAPGKV CHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEECCEECCCCCCEECCCEE YVLSDEVGVQQHAGALAFVAPADPAGLIGALPPADSAVLMLSGANEALVEASLALAEQGG EEEECCCCHHHHCCEEEEEECCCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCC WLAGQSTDGCYDPAAAARLARQGILTGDPAQLAQALAQRWPA EEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SETNGAMGTPVALLGRPGQARERLREALGLAGAQVVLEDEPAAVDVQMLRDAEPVAVLV CCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCEEEHHHHCCCCCEEEEE ALEPSIEDALEALEPAFNMPGVTVIFDEAELTVRREGWEAQRWVRHLAAKLHGHADVLPP EECCCHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCC GTESEPSLQPEPGLTLAPQQHSDLQLDQHLEAAAHAFDSVPGDALFAHASMQEAAPAAVE CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHCCCHHC KPGLALGDSSTWGLVDEVAVVVRPRAEPDVAALSTGGLSLVDLEHNGSVTGAVLVVAGIG CCCCEECCCCCCCHHHHHHEEECCCCCCCCEEEECCCEEEEEECCCCCCEEEEEEEEECC GPDAIRRLLAALPPEFPRAVLVRMTLDGGQYGNLVRQMGRVSALPVELGEAGQVVAPGKV CHHHHHHHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCEECCEECCCCCCEECCCEE YVLSDEVGVQQHAGALAFVAPADPAGLIGALPPADSAVLMLSGANEALVEASLALAEQGG EEEECCCCHHHHCCEEEEEECCCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHCCC WLAGQSTDGCYDPAAAARLARQGILTGDPAQLAQALAQRWPA EEECCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein L-glutamate O5-methyl ester; H2O
Specific reaction: protein L-glutamate O5-methyl ester + H2O = protein L-glutamate + methanol
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA