| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is rimJ [H]
Identifier: 78048782
GI number: 78048782
Start: 3677904
End: 3678527
Strand: Reverse
Name: rimJ [H]
Synonym: XCV3226
Alternate gene names: 78048782
Gene position: 3678527-3677904 (Counterclockwise)
Preceding gene: 78048783
Following gene: 78048778
Centisome position: 71.04
GC content: 66.99
Gene sequence:
>624_bases ATGAGTCTTCCGCTGTTTGCGCCGATCCGCCGCGCCGACGGCGTGGTGCTGTGCGATCTGGCCGTGGTCGATCCGGCTGC AATGGCCGACTACCACACGCGCAACCGCGCTCATCTGGCCGATGCGATGCCGCTGCGGCCGCCCGCGTTCTACACCGTCG AAGGCTGGCGCCGCCTGTGCATGGCATACCGCGGCGCGATCCCTGGCGAGCGCGAGTTGCAACTGGTCGTGTTGCAGGGC GAGCAGGTGATCGGCACCACCGGGTTCACGCAGATCCAGCGCGGCGCCTTCCAGGCGTGCCACATGGGCTATGGCCTGGA CGCGGCGCAGCAGGGACGGGGTTTGATCCAGTGGGCAGCCACGCAAGGGATCGCTTTTGCCTTCGGCCAGCTCGGCCTGC ACCGGGTGATGGCGCAATACGTTCCGGAGAATCTGCGCAGTGCGCGCGTGCTGCGGCGGCTGGGTTTTCAGATCGAAGGC TATGCGCGGCGCTATCTGCAGTTGAATGGCCACTGGCGCGATCACGTGCTCACCAGCAGATTGCGCGACGACGGCACGCC TGGCGAAGGCGCGGTGGATGATGAGCCGGGTTCAGGGCGCAGCGCTCGAGAGCTCAAGCCGTAA
Upstream 100 bases:
>100_bases TGACGCCCTGCTTTGGAAACGGCTTGCGGAGCATGATCGGTATGCATCAGCCGGATGCACCTGGCAGCAAGATGACACGC GTGATTGAGGCGTGGCCGCC
Downstream 100 bases:
>100_bases TTCATCGGCGGCTAGCGTGCTGTCTTGCGCAAGCTCGATCTGCGTTGGCCGGCCACGTTGTTTGAGTTGATCGCGCAACT GCGCCGCCCAGGTCTGCACG
Product: ribosomal protein alanine N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSLPLFAPIRRADGVVLCDLAVVDPAAMADYHTRNRAHLADAMPLRPPAFYTVEGWRRLCMAYRGAIPGERELQLVVLQG EQVIGTTGFTQIQRGAFQACHMGYGLDAAQQGRGLIQWAATQGIAFAFGQLGLHRVMAQYVPENLRSARVLRRLGFQIEG YARRYLQLNGHWRDHVLTSRLRDDGTPGEGAVDDEPGSGRSARELKP
Sequences:
>Translated_207_residues MSLPLFAPIRRADGVVLCDLAVVDPAAMADYHTRNRAHLADAMPLRPPAFYTVEGWRRLCMAYRGAIPGERELQLVVLQG EQVIGTTGFTQIQRGAFQACHMGYGLDAAQQGRGLIQWAATQGIAFAFGQLGLHRVMAQYVPENLRSARVLRRLGFQIEG YARRYLQLNGHWRDHVLTSRLRDDGTPGEGAVDDEPGSGRSARELKP >Mature_206_residues SLPLFAPIRRADGVVLCDLAVVDPAAMADYHTRNRAHLADAMPLRPPAFYTVEGWRRLCMAYRGAIPGERELQLVVLQGE QVIGTTGFTQIQRGAFQACHMGYGLDAAQQGRGLIQWAATQGIAFAFGQLGLHRVMAQYVPENLRSARVLRRLGFQIEGY ARRYLQLNGHWRDHVLTSRLRDDGTPGEGAVDDEPGSGRSARELKP
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5 [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=167, Percent_Identity=38.9221556886228, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 22926; Mature: 22794
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPLFAPIRRADGVVLCDLAVVDPAAMADYHTRNRAHLADAMPLRPPAFYTVEGWRRLC CCCCCCCHHHHCCCEEEEEEEHHCHHHHHHHHCCCCHHHHHCCCCCCCCEEEHHHHHHHH MAYRGAIPGERELQLVVLQGEQVIGTTGFTQIQRGAFQACHMGYGLDAAQQGRGLIQWAA HHHHCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEHH TQGIAFAFGQLGLHRVMAQYVPENLRSARVLRRLGFQIEGYARRYLQLNGHWRDHVLTSR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHH LRDDGTPGEGAVDDEPGSGRSARELKP HHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLPLFAPIRRADGVVLCDLAVVDPAAMADYHTRNRAHLADAMPLRPPAFYTVEGWRRLC CCCCCCHHHHCCCEEEEEEEHHCHHHHHHHHCCCCHHHHHCCCCCCCCEEEHHHHHHHH MAYRGAIPGERELQLVVLQGEQVIGTTGFTQIQRGAFQACHMGYGLDAAQQGRGLIQWAA HHHHCCCCCCCCEEEEEEECCEEECCCCHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEHH TQGIAFAFGQLGLHRVMAQYVPENLRSARVLRRLGFQIEGYARRYLQLNGHWRDHVLTSR HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEEEECCCHHHHHHHHH LRDDGTPGEGAVDDEPGSGRSARELKP HHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]