Click here to switch to the map view.

The map label for this gene is 78048773

Identifier: 78048773

GI number: 78048773

Start: 3667364

End: 3667693

Strand: Reverse

Name: 78048773

Synonym: XCV3217

Alternate gene names: NA

Gene position: 3667693-3667364 (Counterclockwise)

Preceding gene: 78048774

Following gene: 78048771

Centisome position: 70.83

GC content: 59.39

Gene sequence:

>330_bases
ATGGCTTTTCCAACCGCAGTCAATCCGCAGATCACCGATGCCGTCACCCAGGCCAACGTCAAGGTCGTTGGCGAAGCGCC
AGCGTTTGCGATGGGTTCGATTTACCAAAGCGTGGCCCATTCGGCCGGCATCCTGTTTCAGAATGCCCTCGCTGCACAAC
AGCAGCAAACCCCCTTGGCGCAGGCGGCCAACAACCAAGGCGTGATGCAGACCTACGGTGTCGATACCGGCGCTTGCGCG
GCAGATGTCGAGAACGTTGCGCAAGGCGGTGCCGCAGACACTCTGAACAGTCTGCTCACCGTGCTCACCTCGTTCGACAC
TGCAAAGTAA

Upstream 100 bases:

>100_bases
TCAGCGGGGCGTTGCGGTGACATGACCGCGATGCGTTGTTAGCGCCGCTGGGCCGGTACAACGCAGACCGCCGTGCATCC
ATTCACTCAGGAGTGCATTG

Downstream 100 bases:

>100_bases
CCGCCCATGGCGACAGCGTCACGGCTGTCGCCATGCTTGCCTGTGCAAATACCTCGCTCAGGCCGCGTTCTCGTCGCGCG
CTTGCGGCGGCAGCAGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: RebB Like Protein; R Body Protein RebB-Like Protein

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MAFPTAVNPQITDAVTQANVKVVGEAPAFAMGSIYQSVAHSAGILFQNALAAQQQQTPLAQAANNQGVMQTYGVDTGACA
ADVENVAQGGAADTLNSLLTVLTSFDTAK

Sequences:

>Translated_109_residues
MAFPTAVNPQITDAVTQANVKVVGEAPAFAMGSIYQSVAHSAGILFQNALAAQQQQTPLAQAANNQGVMQTYGVDTGACA
ADVENVAQGGAADTLNSLLTVLTSFDTAK
>Mature_108_residues
AFPTAVNPQITDAVTQANVKVVGEAPAFAMGSIYQSVAHSAGILFQNALAAQQQQTPLAQAANNQGVMQTYGVDTGACAA
DVENVAQGGAADTLNSLLTVLTSFDTAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11070; Mature: 10939

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFPTAVNPQITDAVTQANVKVVGEAPAFAMGSIYQSVAHSAGILFQNALAAQQQQTPLA
CCCCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QAANNQGVMQTYGVDTGACAADVENVAQGGAADTLNSLLTVLTSFDTAK
HHCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFPTAVNPQITDAVTQANVKVVGEAPAFAMGSIYQSVAHSAGILFQNALAAQQQQTPLA
CCCCCCCCHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
QAANNQGVMQTYGVDTGACAADVENVAQGGAADTLNSLLTVLTSFDTAK
HHCCCCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA