| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is gtrB [C]
Identifier: 78048739
GI number: 78048739
Start: 3616434
End: 3617480
Strand: Reverse
Name: gtrB [C]
Synonym: XCV3183
Alternate gene names: 78048739
Gene position: 3617480-3616434 (Counterclockwise)
Preceding gene: 78048740
Following gene: 78048738
Centisome position: 69.86
GC content: 63.99
Gene sequence:
>1047_bases GTGAGCACGATCGAGACTGCGCAACTGCCGCCGGCACCCGAACGCCTGACGGTGCTCATCGCGGCCTTCAATGAAGAAAC CAGCATTCCGCTGCTGCATCCGCGCCTGTGCGCGGTGTTGGCGCAGCTGCCCGGACTTCAGACGCACGTGCTGTATGTCG ACGACGGCAGCACCGATGGCACCTGGGAGGTGTTGCATGCGCTGACCGAAGCGGATGCGCAGGTGAGTGCGGTGCGGTTG TCGCGCAATTTCGGCAAGGAAGTGGCAATTTCTGCCGGACTGGACCACGTGCTCCCGGGTGCGGTGGTGTTGCTCGATGC CGATGGCCAGGATCCGCCGGAGCTGATCCCGGAATTCGTTGCGCTATGGCGTGGCGGCTACGACAACATCTTCGGTACGC GGGTCATTCGCGAGGGCGAGAATTGGCTCAAGCGTAGCGCTGCGCACGCGTTTTATCGGGTGATCCGGCGCTTGTCGCGT ACCCCGATTCCTGCCGATACCGGCGATTTCCGCTTGCTGTCGCCGCGTGTCGTGCAAGCCTTGCAGCAGCTGCGCGAGCG CCACCGTTTCATGAAGGGGCTCTTCGGCTGGGTCGGGTTTCGCCAGGTAGCGCTGCCGTATCGGCGTGAGCCGCGTCTGT CTGGGCACAGCAAGTTCACGGTATGGCGGCTGTGGAATTTCGCGCTCGATGGCATTACCAGTTTTTCCACGGTGCCGCTG CGCGCGGCAACATATCTGGGCCTGCTGACCGCGGTGCTGGCGTTCCTGTTCGGCGCGTGGGTCGTCATCAAGGCTGCGCT GATGGGCGACCCAGTGGCCGGGTGGCCGACGCTGATGTCGGTGATCCTGTTTCTGGGGGGCGTTCAGCTGATTGCCCTGG GCCTGATTGGCGAATACCTGGGCCGCCTGTACGACGAGGCCAAGCAGCGCCCGCTGTATCTGGTCGATACCCACCGCGGC GCGGTGGGAGTAGTCTGCGATCATCAGACCAAGCGCGGAGCGGGCCATGCAGACCGTACGACAGCTGTTGGGGACCAAGC AGGTTGA
Upstream 100 bases:
>100_bases ACGCGCGTCGTCCGGGTGCATTCGTGCAGCGGCGTGCGACGTGGATCCAGCGGCAGGCGCGCCAGTTGGGCGGCCCTGTC TATCTGCAGGGGCCATCACG
Downstream 100 bases:
>100_bases GGTATTTGCGGTTGCCGCCGATGCCGCGGTGATCGAGGCGATTCGCCTGATGGCCGAGAAGGCCATCGGCGCGGTCCTGG TGATGGAAGGGACGCGCTTG
Product: putative bactoprenol glucosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSTIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRL SRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGENWLKRSAAHAFYRVIRRLSR TPIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL RAATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRG AVGVVCDHQTKRGAGHADRTTAVGDQAG
Sequences:
>Translated_348_residues MSTIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRL SRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGENWLKRSAAHAFYRVIRRLSR TPIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL RAATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRG AVGVVCDHQTKRGAGHADRTTAVGDQAG >Mature_347_residues STIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDGTWEVLHALTEADAQVSAVRLS RNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFVALWRGGYDNIFGTRVIREGENWLKRSAAHAFYRVIRRLSRT PIPADTGDFRLLSPRVVQALQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPLR AATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYLGRLYDEAKQRPLYLVDTHRGA VGVVCDHQTKRGAGHADRTTAVGDQAG
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]
Homologues:
Organism=Homo sapiens, GI4503363, Length=178, Percent_Identity=26.9662921348315, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI1788692, Length=301, Percent_Identity=41.1960132890365, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1788588, Length=305, Percent_Identity=32.1311475409836, Blast_Score=162, Evalue=4e-41, Organism=Drosophila melanogaster, GI24585265, Length=178, Percent_Identity=29.2134831460674, Blast_Score=69, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 38258; Mature: 38126
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDG CCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC TWEVLHALTEADAQVSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHH ALWRGGYDNIFGTRVIREGENWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQA HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHH LQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHH RAATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRLYDEAKQRPLYLVDTHRGAVGVVCDHQTKRGAGHADRTTAVGDQAG HHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure STIETAQLPPAPERLTVLIAAFNEETSIPLLHPRLCAVLAQLPGLQTHVLYVDDGSTDG CCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCCC TWEVLHALTEADAQVSAVRLSRNFGKEVAISAGLDHVLPGAVVLLDADGQDPPELIPEFV HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHCCCEEEEEECCCCCCHHHHHHHH ALWRGGYDNIFGTRVIREGENWLKRSAAHAFYRVIRRLSRTPIPADTGDFRLLSPRVVQA HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHH LQQLRERHRFMKGLFGWVGFRQVALPYRREPRLSGHSKFTVWRLWNFALDGITSFSTVPL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCHH RAATYLGLLTAVLAFLFGAWVVIKAALMGDPVAGWPTLMSVILFLGGVQLIALGLIGEYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GRLYDEAKQRPLYLVDTHRGAVGVVCDHQTKRGAGHADRTTAVGDQAG HHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]