| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048704
Identifier: 78048704
GI number: 78048704
Start: 3570707
End: 3572716
Strand: Reverse
Name: 78048704
Synonym: XCV3148
Alternate gene names: NA
Gene position: 3572716-3570707 (Counterclockwise)
Preceding gene: 78048705
Following gene: 78048703
Centisome position: 68.99
GC content: 64.18
Gene sequence:
>2010_bases ATGTCCCCCACCGTGCGCCGATCACTCACCGTTGCATTGTCGCTGGCCTGCGTCGCTGCGCCGGCGCTTGCGGCTGCCGC GCCAGCCAACGCCGCTCCCGCTGCCACGCCTGCGCCGGCAAGCGAGTTCGATCCGCTGGCCCTGTTCGCGCCCCTGCAAT TGCCCGACGCTCCGAATAGCTACCGCAACGGCAGCGGCGTACCTGGCCCGGCGTTCTGGCAGAACCGCGCCGATTACGAT CTCAACGCAAGCATCGACCCGGCAACGCATTCCCTCAGCGGCGAGGCCGCCATCACCTACACCAACCACAGCCCCGACAC GCTGGACGTGCTGTGGCTGCAACTGGACCAGAACATCTACCGCGCCGACGCGCGCGCTGCCGCCAGCCGGCCGCTCAAGC GCAAGCAGTTCACCGATGGCATGCAGATCGCCAGCGTCGAGATCGATCAAGGCGGGCGCCGCCAGCCGGCGCGCTTCATC GTCGACGACACCCGCATGCGGGTGGATCTGCCGCAACCGCTGGCCGGGCAGGGCAAGGCGCTCACCGTGCACATCCGTTA CCGCTACACGATTCCCGGCACCTGGGGCGGGCGCACGGCGGTCAGTGCCAGCAAGCAAGGCGAGATCTACGAGATTGCGC AGTGGTATCCGCGCATGGCGGTGTACGACGATCTGCGTGGCTGGGACACGCAACCGTATCTGGGATCGGAGTTCTACCTG GAGTACGGCAATTTCGACTATGCCGTGACCGTGCCGGAGGGCTTTCTGGTCGCCGGCTCCGGTGCGCTGACCAATCCGCA GGACGTACTCAGCCGCACCGAACAGCAACGCCTGGAACACGCCCGCAGCAGCGACCGCACCGTGTTGATCCGCACGCCTG CCGAGGTAATCGCAGGTACGGCCAAGCCGGCGGGCAAGGGCACGCAAACCTGGCGCTTCCACATGGATCACACCCGCGAC GTCGCATTTGCCGCATCGCCGGCGTTCGTCTGGGATGCGGCGCGCATCAATTTGCCGGGCGGCAAGCACGCGCTTGCGAT GTCGGTGTACCCGCTGGAAGGCGTGGGCGCAGACAAGTGGAACCGCTCTACCGAATACGTCAAAGGCGCCATCGAGCATT TTTCGCAGTGGTATCCGTATCCGTGGCCGGCAGCGATCAACCTGGGCGGCTATGGGGCCGGCATGGAATATCCGGGCATC GTCTTCGATGGTTTCGAAGACGGCGGCAAGGACCTGTTCTGGATCACCGCACACGAAATCGGCCACACCTGGTTCCCGAT GATCGTCGGCTCCAACGAGCGCCGGCATGCGTTCATGGATGAAGGTTTCAATACCTTCATCGACGTGTATGCATCGGATG CGTTCAACAAGGGTGAATACGCGCCCAAGCGCGATTCGGAATATGCGCCCAAAGGTGGCAACCCGGTCGACGAAATCCTG CCGTTACTGGCCGACACCCACGCGCCGACGTTGATGGACAACGCAGATTCCAACAGCGAGACCTATCGCCATCCGCTGAC CTACTTCAAGGGTGCTCTCGGCCTGGTGCTGTTGCGCGAGCAGATCCTGGGACCGGCGCGTTTCGATCCTGCATTTCGCA AATACATCGCCACCTGGGCTTACAAGCATCCCACGCCCTCGGACTTCTTCCGGCTGATGGAAAGCGAAAGCGGTGAGGAC CTGTCCTGGTGGTGGCGCGGCTGGTATCTCAACAATTGGCAGCTGGACATGGGCATCGCCGACGCGCATTACGTCGACCA CGACCCGGCCAAGGGAGTGCAAGTCACATTGCGCAGCCGGCAGAAGTTGGTGATGCCGGCGACCCTGCGTGCGGACCTGG CCGATGGCAGCCACCTGGACCGACGCATTCCGGTGGAAACATGGCTGCAGACCACTACCCCCACAGTCACCGTGCCGACC ACCCAGAGGGTGCTGCACGTCACCTTGGACCCGGACCATGTGCTGCCAGATGCCGACCGCAGCGACGCGCGTGTGGACAT CACCGGCTGA
Upstream 100 bases:
>100_bases ACCTCCCAAACCTCAGGCAGCCGCAACCGGGACCAATGGCATTCCCGCGCGCGGCAAACTGCGCCGTAGGATGGGAATTC CCTCCGCCGCAGGATTTCGC
Downstream 100 bases:
>100_bases GCATTGCGCGAGCGGGGTGCCGACGTGGCCGCAGCGCGGTCGCGTCGGTGGCTGCGTGCGGCAACCGCCGACGAAAACGG AAACAAGCGCCTGCGTTGAT
Product: putative aminopeptidase precursor
Products: NA
Alternate protein names: Aminopeptidase; Peptidase M1 Membrane Alanine Aminopeptidase; Peptidase; Aminopeptidase N-Like Protein; Aminopeptidase N; Secreted Aminopeptidase; M1 Family Aminopeptidase; Membrane Alanine Aminopeptidase; Aminopeptidase M1 Family; Aminopeptidase Protein
Number of amino acids: Translated: 669; Mature: 668
Protein sequence:
>669_residues MSPTVRRSLTVALSLACVAAPALAAAAPANAAPAATPAPASEFDPLALFAPLQLPDAPNSYRNGSGVPGPAFWQNRADYD LNASIDPATHSLSGEAAITYTNHSPDTLDVLWLQLDQNIYRADARAAASRPLKRKQFTDGMQIASVEIDQGGRRQPARFI VDDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYL EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEHARSSDRTVLIRTPAEVIAGTAKPAGKGTQTWRFHMDHTRD VAFAASPAFVWDAARINLPGGKHALAMSVYPLEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGI VFDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEIL PLLADTHAPTLMDNADSNSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGED LSWWWRGWYLNNWQLDMGIADAHYVDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRIPVETWLQTTTPTVTVPT TQRVLHVTLDPDHVLPDADRSDARVDITG
Sequences:
>Translated_669_residues MSPTVRRSLTVALSLACVAAPALAAAAPANAAPAATPAPASEFDPLALFAPLQLPDAPNSYRNGSGVPGPAFWQNRADYD LNASIDPATHSLSGEAAITYTNHSPDTLDVLWLQLDQNIYRADARAAASRPLKRKQFTDGMQIASVEIDQGGRRQPARFI VDDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYL EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEHARSSDRTVLIRTPAEVIAGTAKPAGKGTQTWRFHMDHTRD VAFAASPAFVWDAARINLPGGKHALAMSVYPLEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGI VFDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEIL PLLADTHAPTLMDNADSNSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGED LSWWWRGWYLNNWQLDMGIADAHYVDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRIPVETWLQTTTPTVTVPT TQRVLHVTLDPDHVLPDADRSDARVDITG >Mature_668_residues SPTVRRSLTVALSLACVAAPALAAAAPANAAPAATPAPASEFDPLALFAPLQLPDAPNSYRNGSGVPGPAFWQNRADYDL NASIDPATHSLSGEAAITYTNHSPDTLDVLWLQLDQNIYRADARAAASRPLKRKQFTDGMQIASVEIDQGGRRQPARFIV DDTRMRVDLPQPLAGQGKALTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYLE YGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEHARSSDRTVLIRTPAEVIAGTAKPAGKGTQTWRFHMDHTRDV AFAASPAFVWDAARINLPGGKHALAMSVYPLEGVGADKWNRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIV FDGFEDGGKDLFWITAHEIGHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEILP LLADTHAPTLMDNADSNSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWAYKHPTPSDFFRLMESESGEDL SWWWRGWYLNNWQLDMGIADAHYVDHDPAKGVQVTLRSRQKLVMPATLRADLADGSHLDRRIPVETWLQTTTPTVTVPTT QRVLHVTLDPDHVLPDADRSDARVDITG
Specific function: Unknown
COG id: COG0308
COG function: function code E; Aminopeptidase N
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74124; Mature: 73992
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPTVRRSLTVALSLACVAAPALAAAAPANAAPAATPAPASEFDPLALFAPLQLPDAPNS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC YRNGSGVPGPAFWQNRADYDLNASIDPATHSLSGEAAITYTNHSPDTLDVLWLQLDQNIY CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHH RADARAAASRPLKRKQFTDGMQIASVEIDQGGRRQPARFIVDDTRMRVDLPQPLAGQGKA HHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCE LTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYL EEEEEEEEEEECCCCCCCCEECCCCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCEEEE EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEHARSSDRTVLIRTPAEVIAGT EECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCC AKPAGKGTQTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKHALAMSVYPLEGVGADKW CCCCCCCCCEEEEECCCCCCEEEECCCCEEEECEEEECCCCCEEEEEEEECCCCCCCCCC NRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIVFDGFEDGGKDLFWITAHEI CCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHC GHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEIL CCEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PLLADTHAPTLMDNADSNSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWA HHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YKHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGIADAHYVDHDPAKGVQVTLRSR CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECC QKLVMPATLRADLADGSHLDRRIPVETWLQTTTPTVTVPTTQRVLHVTLDPDHVLPDADR CEEEECHHHEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCC SDARVDITG CCCEEEECC >Mature Secondary Structure SPTVRRSLTVALSLACVAAPALAAAAPANAAPAATPAPASEFDPLALFAPLQLPDAPNS CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCC YRNGSGVPGPAFWQNRADYDLNASIDPATHSLSGEAAITYTNHSPDTLDVLWLQLDQNIY CCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHH RADARAAASRPLKRKQFTDGMQIASVEIDQGGRRQPARFIVDDTRMRVDLPQPLAGQGKA HHHHHHHHCCCCHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCCE LTVHIRYRYTIPGTWGGRTAVSASKQGEIYEIAQWYPRMAVYDDLRGWDTQPYLGSEFYL EEEEEEEEEEECCCCCCCCEECCCCCCCEEEHHHHCCCHHHHHHCCCCCCCCCCCCEEEE EYGNFDYAVTVPEGFLVAGSGALTNPQDVLSRTEQQRLEHARSSDRTVLIRTPAEVIAGT EECCEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCC AKPAGKGTQTWRFHMDHTRDVAFAASPAFVWDAARINLPGGKHALAMSVYPLEGVGADKW CCCCCCCCCEEEEECCCCCCEEEECCCCEEEECEEEECCCCCEEEEEEEECCCCCCCCCC NRSTEYVKGAIEHFSQWYPYPWPAAINLGGYGAGMEYPGIVFDGFEDGGKDLFWITAHEI CCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCEEEECCCCCCCEEEEEEEHHC GHTWFPMIVGSNERRHAFMDEGFNTFIDVYASDAFNKGEYAPKRDSEYAPKGGNPVDEIL CCEEEEEEECCCCCCHHHHHCCCCCEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHH PLLADTHAPTLMDNADSNSETYRHPLTYFKGALGLVLLREQILGPARFDPAFRKYIATWA HHHHCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YKHPTPSDFFRLMESESGEDLSWWWRGWYLNNWQLDMGIADAHYVDHDPAKGVQVTLRSR CCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCEEEECCCCCCCCCCCCCCCCEEEEEECC QKLVMPATLRADLADGSHLDRRIPVETWLQTTTPTVTVPTTQRVLHVTLDPDHVLPDADR CEEEECHHHEEECCCCCCCCCCCCHHHHHCCCCCEEEECCCCEEEEEEECCCCCCCCCCC SDARVDITG CCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA