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The map label for this gene is perM [C]

Identifier: 78048658

GI number: 78048658

Start: 3522930

End: 3524096

Strand: Reverse

Name: perM [C]

Synonym: XCV3102

Alternate gene names: 78048658

Gene position: 3524096-3522930 (Counterclockwise)

Preceding gene: 78048659

Following gene: 78048657

Centisome position: 68.05

GC content: 64.18

Gene sequence:

>1167_bases
ATGACTTTGACTCCCGAAGCCGAAATTGCCCTGTTCCTGCGTCGCCTCAAGTGGGCGGCGGTGATTGTCGGTGTGTTGTG
GGTGGTCTCGCTGCTGGCGCCGATCCTGACCCCGTTCGTGCTGGCGCTGTTGCTGGCCTGGCTGGGCGACCCGCTGGTGG
ATCGCATCGAACGTGCCGGACGCTCGCGGAATGTCGCGGTGATGCTGGTCTTCGTGCTGGCGACGCTGCTGTTCGTGCTG
GCGCTGATGATTCTGGTGCCGATGATCGAGCGCCAGATCATGACCTTGATCGATGCGCTGCCGCAGATGCGCAACTGGGC
GATTGGCACGGCCATCCCGTGGCTGGAAGCCAAGACCGGCATGCAGCTGATGGCCTGGCTGGATCCGGAGCGCTTGATCG
ACTGGATCCGCAGCCATTGGGAACAGGCCGGTGGCGCCGCCAAGACGCTCTTCGGCTACGTGTCGCGCTCGGGCTTTGCG
ATGGTGACCTGGGTGATCAACCTGGCGCTGCTGCCGATCCTGGCGTTCTACTTCCTGCGCGACTGGGATCGCCTGGTCGA
ACGCGTGGCTGCCGTCATCCCGCGCGCCTACATTGGTACCGTGAGTCGCCTGGCACAGGAATCCAACGACGTGCTCGGTG
GCTTCATCCGTGGCCAGTTCCTGGTGATGCTGGCGCTGGGTGCGATTTACGCCACCGGTATGTCCATCATCGGGCTCAAC
CTGGGCCTGTTGATCGGCATCATCGCGGGCTTGATCAGCTTCATTCCGTACCTGGGCGCGACCACAGGCATCGTGCTGGC
GCTACTGGCAGCCATCGTGCAGGCGCAAGGGCTGGATCTGAAATTGCTGGTCGGCGTGGGTGTCGTGTTCACGGTGGGCC
AGCTGCTGGAAAGCTACGTGCTCACGCCGCGTATCGTCGGCGACAAGATCGGCCTGCACCCGGTGGCGGTGATCTTCGCG
GTGATGGCCGGCGGCCAGTTGTTCGGCTTTCTCGGGATGTTGCTGGCATTGCCGGTCGCGGCAGTGGCCAACGTGCTGTT
GCGCTATGCGCATGAGCAGTACACGCGCAGCGATCTGTATGCGGGCGAGCGCGCCGGCATCGTGCTGCAGTCCACGCCCG
AGCGCAGCGTGATCATCGACCCCAGCAAGGACCCGGACCGGTCGTGA

Upstream 100 bases:

>100_bases
TCAACCGTATGCTCGGCGACAACAGCCCGCTGGTCTCGGTCTCGGTACCGACCGAAGGCCCTATCATTCTCGAAAACGAG
CACGCCGAGTACCGCCTGAA

Downstream 100 bases:

>100_bases
GTGTTCCGCAGTTGCCGCTGGCGTTGCGCGCGCCACCCGATCAGCGTTTCGACAGTTACATCGCCGCGCCCGACGGCCTG
CTTGCGCAGTTGCAGGCGCT

Product: putative permease (PerM) family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVMLVFVLATLLFVL
ALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFA
MVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFA
VMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLQSTPERSVIIDPSKDPDRS

Sequences:

>Translated_388_residues
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVMLVFVLATLLFVL
ALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFA
MVTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFA
VMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLQSTPERSVIIDPSKDPDRS
>Mature_387_residues
TLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAGRSRNVAVMLVFVLATLLFVLA
LMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTGMQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAM
VTWVINLALLPILAFYFLRDWDRLVERVAAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLNL
GLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYVLTPRIVGDKIGLHPVAVIFAV
MAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLYAGERAGIVLQSTPERSVIIDPSKDPDRS

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1788838, Length=322, Percent_Identity=27.639751552795, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42260; Mature: 42129

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
RSRNVAVMLVFVLATLLFVLALMILVPMIERQIMTLIDALPQMRNWAIGTAIPWLEAKTG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHCC
MQLMAWLDPERLIDWIRSHWEQAGGAAKTLFGYVSRSGFAMVTWVINLALLPILAFYFLR
HHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
DWDRLVERVAAVIPRAYIGTVSRLAQESNDVLGGFIRGQFLVMLALGAIYATGMSIIGLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLLIGIIAGLISFIPYLGATTGIVLALLAAIVQAQGLDLKLLVGVGVVFTVGQLLESYV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LTPRIVGDKIGLHPVAVIFAVMAGGQLFGFLGMLLALPVAAVANVLLRYAHEQYTRSDLY
CCCHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
AGERAGIVLQSTPERSVIIDPSKDPDRS
CCCCCCEEEECCCCCCEEECCCCCCCCC
>Mature Secondary Structure 
TLTPEAEIALFLRRLKWAAVIVGVLWVVSLLAPILTPFVLALLLAWLGDPLVDRIERAG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC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CCCCCCEEEECCCCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]