Click here to switch to the map view.

The map label for this gene is 78048567

Identifier: 78048567

GI number: 78048567

Start: 3424254

End: 3424676

Strand: Reverse

Name: 78048567

Synonym: XCV3011

Alternate gene names: NA

Gene position: 3424676-3424254 (Counterclockwise)

Preceding gene: 78048568

Following gene: 78048566

Centisome position: 66.13

GC content: 69.27

Gene sequence:

>423_bases
ATGCTGACGCAGGCACACTTGCACCGGCGCGCGCAGCGTTTGCTGCCCGCCGGTATCGACACGGTGGCGCTGCTTCCCGC
AGCGCTGCCGCACGCTTGGGAGAGCTCGGCGCTGCCGGCCTTGCCGCTGAACCGCGACAGGCGCCGCGGGGTGGTGGGCC
TGCAGCTGCACGCACGCACCGCGCAGCAACTGCGCAGCGGCGGGCATGCGTTCTTGCAGGCGGCAGCGCAGCAGCACACC
CGTACCGGCTACGCCCGGGCACGCAGCTATGGGCCGTGGCAACGGCTGAGCAATGGCAGCTACTGGGCACGCAGCACCAA
TGCGCTGCTCGGGGTACTGCTGGCCACCGACGAAGCGGCGGTGTGGTTGCTGTGGCAACAACCGCAGACCTGCGTTTGGA
ACCATGGTCATTGGCTGCGTTGA

Upstream 100 bases:

>100_bases
ATGGGATCGTTGCTGCTGTTCGGCATCCTGGCCAGCATCATGTGGGTCACCCGCAAGCTCGATTGGTACGAGCTTGGCAA
TAGCCTGCGCTGAGCCCGGC

Downstream 100 bases:

>100_bases
AGCATCGCATTGCAGCCACGCCTTGCTGGCTTACCATGGCGGCATGGCTGGCTCCTCGTTAATGGTGCAAACGGTGCGCG
GCACGCAGGTGCTGCCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MLTQAHLHRRAQRLLPAGIDTVALLPAALPHAWESSALPALPLNRDRRRGVVGLQLHARTAQQLRSGGHAFLQAAAQQHT
RTGYARARSYGPWQRLSNGSYWARSTNALLGVLLATDEAAVWLLWQQPQTCVWNHGHWLR

Sequences:

>Translated_140_residues
MLTQAHLHRRAQRLLPAGIDTVALLPAALPHAWESSALPALPLNRDRRRGVVGLQLHARTAQQLRSGGHAFLQAAAQQHT
RTGYARARSYGPWQRLSNGSYWARSTNALLGVLLATDEAAVWLLWQQPQTCVWNHGHWLR
>Mature_140_residues
MLTQAHLHRRAQRLLPAGIDTVALLPAALPHAWESSALPALPLNRDRRRGVVGLQLHARTAQQLRSGGHAFLQAAAQQHT
RTGYARARSYGPWQRLSNGSYWARSTNALLGVLLATDEAAVWLLWQQPQTCVWNHGHWLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15660; Mature: 15660

Theoretical pI: Translated: 12.20; Mature: 12.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQAHLHRRAQRLLPAGIDTVALLPAALPHAWESSALPALPLNRDRRRGVVGLQLHART
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHH
AQQLRSGGHAFLQAAAQQHTRTGYARARSYGPWQRLSNGSYWARSTNALLGVLLATDEAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEECCHHHHHHHEEECCCCE
VWLLWQQPQTCVWNHGHWLR
EEEEECCCCCEEECCCCCCC
>Mature Secondary Structure
MLTQAHLHRRAQRLLPAGIDTVALLPAALPHAWESSALPALPLNRDRRRGVVGLQLHART
CCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHH
AQQLRSGGHAFLQAAAQQHTRTGYARARSYGPWQRLSNGSYWARSTNALLGVLLATDEAA
HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEECCHHHHHHHEEECCCCE
VWLLWQQPQTCVWNHGHWLR
EEEEECCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA