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The map label for this gene is 78048514

Identifier: 78048514

GI number: 78048514

Start: 3362850

End: 3363449

Strand: Reverse

Name: 78048514

Synonym: XCV2958

Alternate gene names: NA

Gene position: 3363449-3362850 (Counterclockwise)

Preceding gene: 78048515

Following gene: 78048513

Centisome position: 64.95

GC content: 65.17

Gene sequence:

>600_bases
ATGATGACCAAGGCAAAAAAGAAATCCGCGCAGCAAGCGCTGCAGGCACCTGCGCCGGTGTATCAACTGCATGTGGCATT
GACCGGCAGTGCGCCGCTGATCTGGCGGCGCTTGCTGGTGTCGGGCGCAGTACGCCTGGCCACCTTGCATCGCGTATTGC
AGCCGGTGATGGGCTGGAATGGCGCCCATCCCTACGAATTCGACCTCGGCGGCGGGCGTTACGGCGAATCCGGGCTGGAT
GTGCCCGAGCGTCCCCGGCTCAAGCATGCCGGGCGTGTCACGCTGGAAAGCGCGGTGGGCGAACTGGAAGGCTTCGAGTA
TTTCTACGGCGCCGGCCCTGGCTGGCAGCATCGGCTGCAAGTGGAAGCGCTGTTGCCGGCCGATGCCGGCCTGCGCGTGG
CGCGCTGTGTGGACGGTGCCAATGCCTGTCCGCCGAATAGCAGTGGCGGCATTGGCGATTACCAGGCGCTGTTGCACATC
ATCGCCGACCCGGACCACCCGCGGCATGTGCAGGAATTGGCGAGCTTGGGTGGGCGCTTGGAACCTGGGCATTTCGATCT
GGCAGAGGTCAATCGCCTGCTCGCGCGCGTGCGCGAGTGA

Upstream 100 bases:

>100_bases
CCGCCTGGCGGTTGCGCAGTGATTCAATCGCCGATCTGGACAGCGTCTGCATTCGCCTGCCTGGCACGCCATACTGGTAA
CAGGCAGGCACACGCATCGC

Downstream 100 bases:

>100_bases
CAGCGGTGGCGCCTTTCATGGGCGAAGGCGCTGCAAACCTCGTCTCTTGTTCTCCTGGCGACGGCGTTGACGCAGTGCAT
GGGCTGATCAAGCCGCGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MMTKAKKKSAQQALQAPAPVYQLHVALTGSAPLIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDLGGGRYGESGLD
VPERPRLKHAGRVTLESAVGELEGFEYFYGAGPGWQHRLQVEALLPADAGLRVARCVDGANACPPNSSGGIGDYQALLHI
IADPDHPRHVQELASLGGRLEPGHFDLAEVNRLLARVRE

Sequences:

>Translated_199_residues
MMTKAKKKSAQQALQAPAPVYQLHVALTGSAPLIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDLGGGRYGESGLD
VPERPRLKHAGRVTLESAVGELEGFEYFYGAGPGWQHRLQVEALLPADAGLRVARCVDGANACPPNSSGGIGDYQALLHI
IADPDHPRHVQELASLGGRLEPGHFDLAEVNRLLARVRE
>Mature_199_residues
MMTKAKKKSAQQALQAPAPVYQLHVALTGSAPLIWRRLLVSGAVRLATLHRVLQPVMGWNGAHPYEFDLGGGRYGESGLD
VPERPRLKHAGRVTLESAVGELEGFEYFYGAGPGWQHRLQVEALLPADAGLRVARCVDGANACPPNSSGGIGDYQALLHI
IADPDHPRHVQELASLGGRLEPGHFDLAEVNRLLARVRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 21559; Mature: 21559

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTKAKKKSAQQALQAPAPVYQLHVALTGSAPLIWRRLLVSGAVRLATLHRVLQPVMGWN
CCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAHPYEFDLGGGRYGESGLDVPERPRLKHAGRVTLESAVGELEGFEYFYGAGPGWQHRLQ
CCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCEEECCCCCCCCEEE
VEALLPADAGLRVARCVDGANACPPNSSGGIGDYQALLHIIADPDHPRHVQELASLGGRL
EEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
EPGHFDLAEVNRLLARVRE
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MMTKAKKKSAQQALQAPAPVYQLHVALTGSAPLIWRRLLVSGAVRLATLHRVLQPVMGWN
CCCCHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAHPYEFDLGGGRYGESGLDVPERPRLKHAGRVTLESAVGELEGFEYFYGAGPGWQHRLQ
CCCCEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHCCCCEEECCCCCCCCEEE
VEALLPADAGLRVARCVDGANACPPNSSGGIGDYQALLHIIADPDHPRHVQELASLGGRL
EEEECCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
EPGHFDLAEVNRLLARVRE
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]