| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yijE [C]
Identifier: 78048503
GI number: 78048503
Start: 3352531
End: 3353418
Strand: Reverse
Name: yijE [C]
Synonym: XCV2947
Alternate gene names: 78048503
Gene position: 3353418-3352531 (Counterclockwise)
Preceding gene: 78048508
Following gene: 78048499
Centisome position: 64.76
GC content: 66.89
Gene sequence:
>888_bases ATGAGCGCCCAATCGTCGGTGCAGCCCGAGCTTGCGGTACGTCAATGGCGTACGCCGCTTGAGCTTGGTTTTCTGGGCGT GGTGTGGGGCTGCTCGTTTTTGTTCATGCGCGTGGCCGCGCCCAAGTTCGGCACCGTGGTGCTGGTGGAAATTCGCCTGG CGCTGGGTGCGTTGGTGCTGCTGCCATTCCTGTGGCTGGCACGCGAACGTTTCCCGTTGCATCGCTGGCCGATGCTGGCG GCAATCGGTGTGCTCAACTCTGCGTTGCCGTTCCTGCTGTTCGCCTGGGGCGCGCAACATGCACCGGCGGCAGTCGGGGC GATCTGCAATGCGATGACGGTGCTGTTTACCGCGCTGATCGCCTTCCTGTTTTTCGGCGAACGGATCGGCACGCGTCGCG CGCTGGCCTTGCTGGTGGGGTTTATCGGCGTGCTGGTGCTGGCCACCGGCAAATCCGCCGGCTTGAGCGTCGGGCCGGCA GCGCTGGCTGGTGCAACTGCCTCGCTGCTGTACGGCATCGGCTACAACCTGGTGAAGCGCCATATGGGCGATTTGCCGCC TGCTGCGTCGGCGGCGTCCACCCTGGGTTGCAGTGCGCTCTTGCTGGCGCCCTTGGCCTGGTGGCAATGGCCGACCACGC CGGTGCCGGCGGTGGCGTGGGCCTGCGCCACCGCGTTGGGTGTGGTGTGCACCGGGCTGGCATTCTTGATGTACTACCGG CTGATCCAGCGCATCGGCCCGGCGCGTGCGTCCACGGTGACCTATCTGGTGCCGGTGTTCGGCGCGCTGCTGGCATGGTC GCTGCTGGGCGAACCGCTCACCTGGACCATGCTGGTGGCCGCGGTGCTGATCCTCGGCAGCGTCGCCTTCAGCCAGCGCG CCCGCTGA
Upstream 100 bases:
>100_bases CTGCATCATCCCTTCGCGACGATCGTGCCATGTCTCTTAGTCTGCCTGCTGCCGTCTTCTGCCGTTTCATCCCCGCATGG CACGGTTCGGGAGCACGGCC
Downstream 100 bases:
>100_bases CGGGGCGCGACTCGCTCTTGCGATTCCCGATTCAACCGGCCGGCGGCACACGCACCGGCAACGGCACATTGCACAGGTCG ATGTGCCCGGCCGGGCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Drug/Metabolite Transporter Family Protein; ABC Transporter Membrane Spanning Protein; Integral Membrane; DMT Family Permease; Transmembrane Protein; Transporter Drug/Metabolite Exporter Family; Permease; Transmembrane Component Of ABC Transporter; Permease Protein; Transmembrane Drug/Metabolite Transporter; DrugMetabolite Exporter; ABC Transporter; Drug/Metabolite Transporter Superfamily Permease; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; DMT Transporter
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSAQSSVQPELAVRQWRTPLELGFLGVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHRWPMLA AIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALLVGFIGVLVLATGKSAGLSVGPA ALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYR LIQRIGPARASTVTYLVPVFGALLAWSLLGEPLTWTMLVAAVLILGSVAFSQRAR
Sequences:
>Translated_295_residues MSAQSSVQPELAVRQWRTPLELGFLGVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHRWPMLA AIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALLVGFIGVLVLATGKSAGLSVGPA ALAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYR LIQRIGPARASTVTYLVPVFGALLAWSLLGEPLTWTMLVAAVLILGSVAFSQRAR >Mature_294_residues SAQSSVQPELAVRQWRTPLELGFLGVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVLLPFLWLARERFPLHRWPMLAA IGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALIAFLFFGERIGTRRALALLVGFIGVLVLATGKSAGLSVGPAA LAGATASLLYGIGYNLVKRHMGDLPPAASAASTLGCSALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYRL IQRIGPARASTVTYLVPVFGALLAWSLLGEPLTWTMLVAAVLILGSVAFSQRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31313; Mature: 31182
Theoretical pI: Translated: 10.81; Mature: 10.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQSSVQPELAVRQWRTPLELGFLGVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVL CCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LPFLWLARERFPLHRWPMLAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFLFFGERIGTRRALALLVGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMGDLPPAASAASTLGCSALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYR HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIQRIGPARASTVTYLVPVFGALLAWSLLGEPLTWTMLVAAVLILGSVAFSQRAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAQSSVQPELAVRQWRTPLELGFLGVVWGCSFLFMRVAAPKFGTVVLVEIRLALGALVL CCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH LPFLWLARERFPLHRWPMLAAIGVLNSALPFLLFAWGAQHAPAAVGAICNAMTVLFTALI HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AFLFFGERIGTRRALALLVGFIGVLVLATGKSAGLSVGPAALAGATASLLYGIGYNLVKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH HMGDLPPAASAASTLGCSALLLAPLAWWQWPTTPVPAVAWACATALGVVCTGLAFLMYYR HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LIQRIGPARASTVTYLVPVFGALLAWSLLGEPLTWTMLVAAVLILGSVAFSQRAR HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA