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The map label for this gene is ybeB [H]

Identifier: 78048489

GI number: 78048489

Start: 3336331

End: 3336744

Strand: Reverse

Name: ybeB [H]

Synonym: XCV2933

Alternate gene names: 78048489

Gene position: 3336744-3336331 (Counterclockwise)

Preceding gene: 78048490

Following gene: 78048487

Centisome position: 64.43

GC content: 63.53

Gene sequence:

>414_bases
TTGACCAGCCAAGCCCAAGTCATCAAGACCTCCCTTCCGAACCCGCCGCCGTCCGTGCCGGCCCTGTTGGCTACCGTGCG
CGAGGCTGTCGAAGAACTCAAGGCCAAGGACGTGGTCGAGATCGATGTGCGCGGCAAGTCCAGCGTCTGCGACTACATGG
TGGTGGTCTCCGGCACCTCGACCCGCCACGTCAAATCGATCGCCGACGAAGTGGTCAAGTTCGCCAAGCGTCTGGACGTG
ATGCCGCTGGGCGTGGAAGGCGAGCGCGAAGCCGAATGGGTGCTGGTCGACCTGGGCGATGTGGTGGTGCATGTGATGCT
GCCGCGCGTTCGCGAGTTCTATGCACTGGAGCGTCTGTGGACCGTAGGCGATCAACGCCCGTCCGACGAAGACGAGTCCG
ACGAACTGCGCTGA

Upstream 100 bases:

>100_bases
TCCAGCGTGAAGGCCTGTACCGCAGCGTCCGCCCGGCTACCTGAACACGCGTGCTGCCGGACCGGCCTATAATTCACGCC
AATTCCATCGAGTTGCCGCT

Downstream 100 bases:

>100_bases
GTCTGTGCAGGTGCGCCGCAGGCGCGCAGAGACAACAACGGCGCCCTTGGGCGCCGTTGTTGTCTGGGGCGTTCGCTGCG
CAATCGGTCGGCGTCGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLDV
MPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDEDESDELR

Sequences:

>Translated_137_residues
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLDV
MPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDEDESDELR
>Mature_136_residues
TSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLDVM
PLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLWTVGDQRPSDEDESDELR

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Homo sapiens, GI19923977, Length=92, Percent_Identity=43.4782608695652, Blast_Score=81, Evalue=3e-16,
Organism=Escherichia coli, GI87081768, Length=102, Percent_Identity=50, Blast_Score=115, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19923046, Length=79, Percent_Identity=37.9746835443038, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 15258; Mature: 15126

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTS
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCC
TRHVKSIADEVVKFAKRLDVMPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
TVGDQRPSDEDESDELR
HHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSQAQVIKTSLPNPPPSVPALLATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTS
CCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCC
TRHVKSIADEVVKFAKRLDVMPLGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALERLW
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH
TVGDQRPSDEDESDELR
HHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]