| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048169
Identifier: 78048169
GI number: 78048169
Start: 2948295
End: 2948471
Strand: Reverse
Name: 78048169
Synonym: XCV2613
Alternate gene names: NA
Gene position: 2948471-2948295 (Counterclockwise)
Preceding gene: 78048172
Following gene: 78048168
Centisome position: 56.94
GC content: 62.15
Gene sequence:
>177_bases ATGAGTGACGACAAACGCAACGTCGGTTCGCCAGACCGCGACCGCATCAACGTCAATGAAGCCTATGAGCTGCAGTACTG GACCAAGACCCTGGGCGTCAGCGCCGAGCAGTTGCGCGCGGCCGTGCAGAAGGTGGGGCCAATGGCCGCCAGCGTACGCC AGCACCTGGGCAAATAA
Upstream 100 bases:
>100_bases TCACGACGCCTGTTCGAACGCTTTCGCATTGTCGCTACGGGCGCTGCTGGGCCGAAGGCTCACGTTAGCAGACCCGACCA CGACGATACAGGAGCATGTC
Downstream 100 bases:
>100_bases GCGGAAGGTCTGTCATGAGCCTGAGCGAATATCGCCGCAAGCGCAGCTTCAACAAGACCCGCGAGCCGGAGCCGGGCAAG GCCCTGCCGCCGGGGCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 58; Mature: 57
Protein sequence:
>58_residues MSDDKRNVGSPDRDRINVNEAYELQYWTKTLGVSAEQLRAAVQKVGPMAASVRQHLGK
Sequences:
>Translated_58_residues MSDDKRNVGSPDRDRINVNEAYELQYWTKTLGVSAEQLRAAVQKVGPMAASVRQHLGK >Mature_57_residues SDDKRNVGSPDRDRINVNEAYELQYWTKTLGVSAEQLRAAVQKVGPMAASVRQHLGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6486; Mature: 6355
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDKRNVGSPDRDRINVNEAYELQYWTKTLGVSAEQLRAAVQKVGPMAASVRQHLGK CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCC >Mature Secondary Structure SDDKRNVGSPDRDRINVNEAYELQYWTKTLGVSAEQLRAAVQKVGPMAASVRQHLGK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA