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The map label for this gene is 78048164

Identifier: 78048164

GI number: 78048164

Start: 2940503

End: 2941765

Strand: Reverse

Name: 78048164

Synonym: XCV2608

Alternate gene names: NA

Gene position: 2941765-2940503 (Counterclockwise)

Preceding gene: 78048165

Following gene: 78048161

Centisome position: 56.81

GC content: 66.59

Gene sequence:

>1263_bases
ATGGGCATGGGGATCAAAATGTTTCGTTGGGTGATTGCGATCTTGCTGATCGGCGGCAGCGGCTATGCCGTGGCGCGGCA
TCTGCAGGACAGTAATACGGCTGGGCATTACGGCTCGGTCGAAGTTCTCCGCCCGGAAGGGACGCCCAAGGCGATGGTGA
TCCTGCTGCCCGACAGCGCTCATCCGCAAGACAGCCAGAAGCTGGCTGACCTGCTGAGCGACGATGGCGCGCTGGTGGCA
GTGGTCGACACCGCAAACTATCGTGAACACGTGCGCTCGCACCAAGCCGCCTGCAGCTCGCTGGCCGACGATGCCGAGCG
ACTGGGCAAGAAATTGTTGCGCGCCGAACACGTCGATGCGTTCCTGCCGCCGGTGCTGGTGGGGCAGGGCGATGGCGCGG
TGCTGGCGCGTCAGGCGGTGGCCTCGGCCGCGCCCGACGTATTGGGCGGCGCGGTGGTTGCCGACGCCGGCACCAAGGAT
CCAGGCCTGGCGTGCTCGCGCGATCTGCCCAATGCCAGTCAGGGCTTCCTGGACGATCTGGCCGATGCATCCAGCCCGAT
GCAGATCGCAGCGGCCACACGCGGGCACTTCCTGGCTGCGCAGTCGCAGGGCCTGGGCGACCTGCCGCTAGTGGAACTCC
ACGCACCTGGCAGCGACCGTTTGGTGGTGATGTTGTCCGGCGATGGCGGCTGGCGCGAGCTGGATAAAGGCATTGCCGCG
CAGTTGCAGCAGCAGGGCGTGTCGGTGGTGGGCTGGAATAGCCTGCGCTACTTCTGGGGCAGCCGCACGCCGCAGCAGGT
CGGGGCGGATCTGGATCGGGTGATGGCCAGCTATCGCCAGCGCTGGCATATCCAGCACGTCGCCCTTGTTGGGTACTCGT
TCGGTGCCGATGTGTTGCCGTTCGCCTATCCGGAACTGTCGCCCCAGCAACGCGCTTCGGTGCAGTTCGTCAGCCTGCTC
GGCCTGGGCCACGAGGCCGACTTCAAGGTGCGCGTCGGTGGCTGGCTGGGCTGGCATAACGACGCCGAGCGCGATGTGGA
GCCGGCCATCCAGGCGTTGGACGCGCACCGCCTGCAATGCATCTACGGCGACGAAGAAAAGGACACGCTGTGCCCGGAGC
TGCGCGCACGTGGCGTGCAGGTGCTGGCGCGTCCGGGTGGGCATCACTTCGACCACGATCCGGTGGTGCTGGCCAATCTG
CTGATGGAGGGCTGGCAGCATGCAGCGCGGACGCCGATCGCGGAAACAGCGAGCCGCTCCTGA

Upstream 100 bases:

>100_bases
GTTCAGTTGGCTTAACAGCGATGAACACCGCGTGCATACGCAGTGAAACCGGCCGTGTCTGCTGTGGTCAAATCGCAACC
GCTATCAAGGGACTGCCGTC

Downstream 100 bases:

>100_bases
AGCCGCTTGCAACCGACGAAGCGTTGCATAACGTTTTCTGGAGCGGTTGATCGACAAGCGGTGATCGCCAATGAGCACCT
TCCTGCGAAGGTGCTCAACG

Product: type IV secretion system VirJ-like protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MGMGIKMFRWVIAILLIGGSGYAVARHLQDSNTAGHYGSVEVLRPEGTPKAMVILLPDSAHPQDSQKLADLLSDDGALVA
VVDTANYREHVRSHQAACSSLADDAERLGKKLLRAEHVDAFLPPVLVGQGDGAVLARQAVASAAPDVLGGAVVADAGTKD
PGLACSRDLPNASQGFLDDLADASSPMQIAAATRGHFLAAQSQGLGDLPLVELHAPGSDRLVVMLSGDGGWRELDKGIAA
QLQQQGVSVVGWNSLRYFWGSRTPQQVGADLDRVMASYRQRWHIQHVALVGYSFGADVLPFAYPELSPQQRASVQFVSLL
GLGHEADFKVRVGGWLGWHNDAERDVEPAIQALDAHRLQCIYGDEEKDTLCPELRARGVQVLARPGGHHFDHDPVVLANL
LMEGWQHAARTPIAETASRS

Sequences:

>Translated_420_residues
MGMGIKMFRWVIAILLIGGSGYAVARHLQDSNTAGHYGSVEVLRPEGTPKAMVILLPDSAHPQDSQKLADLLSDDGALVA
VVDTANYREHVRSHQAACSSLADDAERLGKKLLRAEHVDAFLPPVLVGQGDGAVLARQAVASAAPDVLGGAVVADAGTKD
PGLACSRDLPNASQGFLDDLADASSPMQIAAATRGHFLAAQSQGLGDLPLVELHAPGSDRLVVMLSGDGGWRELDKGIAA
QLQQQGVSVVGWNSLRYFWGSRTPQQVGADLDRVMASYRQRWHIQHVALVGYSFGADVLPFAYPELSPQQRASVQFVSLL
GLGHEADFKVRVGGWLGWHNDAERDVEPAIQALDAHRLQCIYGDEEKDTLCPELRARGVQVLARPGGHHFDHDPVVLANL
LMEGWQHAARTPIAETASRS
>Mature_419_residues
GMGIKMFRWVIAILLIGGSGYAVARHLQDSNTAGHYGSVEVLRPEGTPKAMVILLPDSAHPQDSQKLADLLSDDGALVAV
VDTANYREHVRSHQAACSSLADDAERLGKKLLRAEHVDAFLPPVLVGQGDGAVLARQAVASAAPDVLGGAVVADAGTKDP
GLACSRDLPNASQGFLDDLADASSPMQIAAATRGHFLAAQSQGLGDLPLVELHAPGSDRLVVMLSGDGGWRELDKGIAAQ
LQQQGVSVVGWNSLRYFWGSRTPQQVGADLDRVMASYRQRWHIQHVALVGYSFGADVLPFAYPELSPQQRASVQFVSLLG
LGHEADFKVRVGGWLGWHNDAERDVEPAIQALDAHRLQCIYGDEEKDTLCPELRARGVQVLARPGGHHFDHDPVVLANLL
MEGWQHAARTPIAETASRS

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44995; Mature: 44864

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMGIKMFRWVIAILLIGGSGYAVARHLQDSNTAGHYGSVEVLRPEGTPKAMVILLPDSA
CCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
HPQDSQKLADLLSDDGALVAVVDTANYREHVRSHQAACSSLADDAERLGKKLLRAEHVDA
CCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPPVLVGQGDGAVLARQAVASAAPDVLGGAVVADAGTKDPGLACSRDLPNASQGFLDDL
HCCCEEEECCCCHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCEECCCCCCCHHHHHHHH
ADASSPMQIAAATRGHFLAAQSQGLGDLPLVELHAPGSDRLVVMLSGDGGWRELDKGIAA
HCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHH
QLQQQGVSVVGWNSLRYFWGSRTPQQVGADLDRVMASYRQRWHIQHVALVGYSFGADVLP
HHHHCCCEEEECCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCC
FAYPELSPQQRASVQFVSLLGLGHEADFKVRVGGWLGWHNDAERDVEPAIQALDAHRLQC
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHCEEE
IYGDEEKDTLCPELRARGVQVLARPGGHHFDHDPVVLANLLMEGWQHAARTPIAETASRS
EECCCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure 
GMGIKMFRWVIAILLIGGSGYAVARHLQDSNTAGHYGSVEVLRPEGTPKAMVILLPDSA
CCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCEEEEEECCCC
HPQDSQKLADLLSDDGALVAVVDTANYREHVRSHQAACSSLADDAERLGKKLLRAEHVDA
CCCHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPPVLVGQGDGAVLARQAVASAAPDVLGGAVVADAGTKDPGLACSRDLPNASQGFLDDL
HCCCEEEECCCCHHHHHHHHHHCCCHHHCCEEEECCCCCCCCCEECCCCCCCHHHHHHHH
ADASSPMQIAAATRGHFLAAQSQGLGDLPLVELHAPGSDRLVVMLSGDGGWRELDKGIAA
HCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHHHHHHH
QLQQQGVSVVGWNSLRYFWGSRTPQQVGADLDRVMASYRQRWHIQHVALVGYSFGADVLP
HHHHCCCEEEECCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCC
FAYPELSPQQRASVQFVSLLGLGHEADFKVRVGGWLGWHNDAERDVEPAIQALDAHRLQC
CCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCEECCCCCCCCHHHHHHHHHHHHCEEE
IYGDEEKDTLCPELRARGVQVLARPGGHHFDHDPVVLANLLMEGWQHAARTPIAETASRS
EECCCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA