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The map label for this gene is yciM [H]

Identifier: 78048049

GI number: 78048049

Start: 2814669

End: 2815847

Strand: Reverse

Name: yciM [H]

Synonym: XCV2493

Alternate gene names: 78048049

Gene position: 2815847-2814669 (Counterclockwise)

Preceding gene: 78048050

Following gene: 78048048

Centisome position: 54.38

GC content: 62.51

Gene sequence:

>1179_bases
ATGGACTTTCTGACCGAGTGGATCTGGTTCTTCCTGTTCGTGCCGCTGGCTGCGCTAGGTGGCTGGATCGTGGGCCGTCG
TGGCGGCCAACGCCATGGCGACACGCAGGTCAGTCGTCTTTCCAGTACTTATTTCCGTGGGTTGAACTATCTGCTCAACG
AGCAGCCGGACAAGGCGATCGAGCTGTTCTTGCATATCGCCGAACTGGATAAGGAAACCTTCGAGACCCAGGTCGCGTTG
GGGCATCTGTTCCGTCGCCGTGGTGAAGTGGACCGTGCGATCCGCCTGCACCAGGGCCTGGTGCAGCGTGGCGACCTGAC
CGATCAGCAGCGCGTCCAGGCTCTGCTGGCGCTCGGCGAGGACTACATGAAGTCGGGTCTGCTGGATCGTGCCGAAACGG
TCTTTACCGAGTTGGCGCAACTGGACCAGCGTGCGCCGCAGGCGCTGCGCCATCTGATCGGCATCTATCAGGCCGAGCGC
GATTGGGAAAAGGCGATCGACAACGCCACCCGCTATGAAGAAGTGACCGGCGAGCCGATGGGCAAACTGATCTCGCAATT
CGAATGCGAACTGGCTGATCGCTATCGCGGCCTGGGCAAGACCGACGATGCGCTACAAGCCATCGCACGTGCCTACCAGG
CCGATGGCACCTCCGTGCGCGCCGGCATTCTGGAAGGGCGCATCGAAGCCGAGCGCGGTCACGACGAAGCGGCAGTGCGC
GCTTTCGAACGGGCGGCCCGGCATGATCCGGAATACCTGCCCGAGATCATTCCTGCATTGATGGCCGCGTATCGACGGGT
CGGCGATATCGCTGGGGCGCGCAACTTCCTGTCGGAGATGACCGAGCACTATCGCGGCATCGCTCCGGTGCTGGCGCTGA
CCCAGTTGATGGAAGCCCAGGATGGCGTCGCGCCTGCGCTGGCCTATCTTGGCCGCCAGCTCAAGGATCGGCCGTCGGTG
CGTGGTGAGTCGGCGTTGATCGATCTCACCCTGGCCGAGGGAAGCGACCCGGTCGGCACCTTGCAGGACCTCAAGCACAT
CACCGACCAATTGCTAGTGCGCAATCCGAGCTACCGATGCACGCGCTGCGGCTTCGGTGCCAAGACGCATCATTGGCAAT
GCCCGAGCTGCAAGGAATGGGGTACGGTCAAACCGCTGTTGAACTACGCGGTGGTCTGA

Upstream 100 bases:

>100_bases
GCGCCAGGCCAACAAGGCTGTTGCGGTCAGTCGCGGCGACGCCAGGCCTGTCACGCCTGCGACCGTCGAGCCGCGCCCCA
TCGATGGACTGTAACGACGT

Downstream 100 bases:

>100_bases
TGGCGTGGCTGTGGTGCGCGCTGCACCTGCTGGTCGCGGCACTGGGGACCTGGGGGCTGCGGCGCTATGCCTTGCACCGC
CGCCTGCTCGATCATCCCGG

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MDFLTEWIWFFLFVPLAALGGWIVGRRGGQRHGDTQVSRLSSTYFRGLNYLLNEQPDKAIELFLHIAELDKETFETQVAL
GHLFRRRGEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQALRHLIGIYQAER
DWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLGKTDDALQAIARAYQADGTSVRAGILEGRIEAERGHDEAAVR
AFERAARHDPEYLPEIIPALMAAYRRVGDIAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSV
RGESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQCPSCKEWGTVKPLLNYAVV

Sequences:

>Translated_392_residues
MDFLTEWIWFFLFVPLAALGGWIVGRRGGQRHGDTQVSRLSSTYFRGLNYLLNEQPDKAIELFLHIAELDKETFETQVAL
GHLFRRRGEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQALRHLIGIYQAER
DWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLGKTDDALQAIARAYQADGTSVRAGILEGRIEAERGHDEAAVR
AFERAARHDPEYLPEIIPALMAAYRRVGDIAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSV
RGESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQCPSCKEWGTVKPLLNYAVV
>Mature_392_residues
MDFLTEWIWFFLFVPLAALGGWIVGRRGGQRHGDTQVSRLSSTYFRGLNYLLNEQPDKAIELFLHIAELDKETFETQVAL
GHLFRRRGEVDRAIRLHQGLVQRGDLTDQQRVQALLALGEDYMKSGLLDRAETVFTELAQLDQRAPQALRHLIGIYQAER
DWEKAIDNATRYEEVTGEPMGKLISQFECELADRYRGLGKTDDALQAIARAYQADGTSVRAGILEGRIEAERGHDEAAVR
AFERAARHDPEYLPEIIPALMAAYRRVGDIAGARNFLSEMTEHYRGIAPVLALTQLMEAQDGVAPALAYLGRQLKDRPSV
RGESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRCTRCGFGAKTHHWQCPSCKEWGTVKPLLNYAVV

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=374, Percent_Identity=38.2352941176471, Blast_Score=266, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44086; Mature: 44086

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLTEWIWFFLFVPLAALGGWIVGRRGGQRHGDTQVSRLSSTYFRGLNYLLNEQPDKAI
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELFLHIAELDKETFETQVALGHLFRRRGEVDRAIRLHQGLVQRGDLTDQQRVQALLALGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DYMKSGLLDRAETVFTELAQLDQRAPQALRHLIGIYQAERDWEKAIDNATRYEEVTGEPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
GKLISQFECELADRYRGLGKTDDALQAIARAYQADGTSVRAGILEGRIEAERGHDEAAVR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
AFERAARHDPEYLPEIIPALMAAYRRVGDIAGARNFLSEMTEHYRGIAPVLALTQLMEAQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGVAPALAYLGRQLKDRPSVRGESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRC
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCE
TRCGFGAKTHHWQCPSCKEWGTVKPLLNYAVV
EECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MDFLTEWIWFFLFVPLAALGGWIVGRRGGQRHGDTQVSRLSSTYFRGLNYLLNEQPDKAI
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
ELFLHIAELDKETFETQVALGHLFRRRGEVDRAIRLHQGLVQRGDLTDQQRVQALLALGE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
DYMKSGLLDRAETVFTELAQLDQRAPQALRHLIGIYQAERDWEKAIDNATRYEEVTGEPM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
GKLISQFECELADRYRGLGKTDDALQAIARAYQADGTSVRAGILEGRIEAERGHDEAAVR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHH
AFERAARHDPEYLPEIIPALMAAYRRVGDIAGARNFLSEMTEHYRGIAPVLALTQLMEAQ
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGVAPALAYLGRQLKDRPSVRGESALIDLTLAEGSDPVGTLQDLKHITDQLLVRNPSYRC
CCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCE
TRCGFGAKTHHWQCPSCKEWGTVKPLLNYAVV
EECCCCCCCCCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]