| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048022
Identifier: 78048022
GI number: 78048022
Start: 2792051
End: 2793037
Strand: Reverse
Name: 78048022
Synonym: XCV2466
Alternate gene names: NA
Gene position: 2793037-2792051 (Counterclockwise)
Preceding gene: 78048023
Following gene: 78048021
Centisome position: 53.94
GC content: 59.88
Gene sequence:
>987_bases GTGATAACTGTTCGCCTTGTAGCGTGCATCCTTGCGGTTGCGTTGTGGTCATGCGCGTTTAGCGCCAATGCCGCCATGTG TAGAGATGCGGCTGACGCCTGCGATCAAGGTCAGGCGTTCTTGGCTGCTCGCATGCTGGCCGATCAGCGCGGCGTTGATT TGTGCAAGCTAGTCGGCGGTTCCAATTCGCTTTACAAGGGGCCTGATGTTGTTGCCGAGAGTGCTGGCATTTATAACGCA CAGGCGACGTGTAGCATCGGTGGGCCTGCTGGTGCTGGTTCCACGTTTTACAGCAAAACGTGTGCCCAGCGTCCCCCCTT GATTGGCGCGTCTTCTTCCGATGGCAGCGGTTTTAGCTGCGATGACGGCTGTTTTTACAATTTCACCGTTGGTGCATCAG GCGGCAGCGGCATGTATCCCAGCGGTGCCACTTGCTCTGCGGGTGATGCGCCACCTTCCACGCCTGGTGATGACGGCGGT GATGGCGACGGCGGCAGCGATGGTGGTGGAGATGGTGGCAGTGACGGTGGTGGAGACGGTGGAAGCGATGGCGGTGGTGA CGGTGGCAGTGACGGTGGCAGTGATGGCGGTGGTGACGGCGACGGCGATGGTGATGGTGATGGCGACGGTGATGGCGACG GTGATACTCCTGGTGATGGTGACGGCACGACGCCTGGTCAGGGTGAAGGCGGCGAGGGCGCTCCCATGTCCGAGCTCTAC AATAAAAGCGGCAAGACAGTTGAGTCTGTGCTGAGCAAATTCAATACGCAGGTGCGCGGCACGCCCATGGTTGCCGGCAT CACGGATTTTATGACTGTGCCCTCCGGTGGATCGTGCCCGGTGTTTTCGCTGGGCGCGTCGAAGTGGTGGAACGCCATGA CGATCAATTTTCATTGTGGCGGCGATTTTCTGGCGTTTCTGCGCGCGGCGGGCTGGGTGATCCTGGCGATTGCTGCTTAC GCTGCGCTCCGTATTGCTGTGACCTGA
Upstream 100 bases:
>100_bases GTCGCCCTCTCTCTTTCAGGGGTAGGGCGATGATCGTTCTCTTGTTCTGTGGATTCATGGGCGCGTTGTGTGGGTGGGCA GGCGTCAAGGGGTTGGATGC
Downstream 100 bases:
>100_bases GGACGACGATATGCAAGCAGGTTGGTTCAATGATTTCACGTCGCGACTATCACGTGCCTTAAAAGCGGTGTGGGATGGAT ATTGCGATTTCATGTCTGAA
Product: filamentous phage phiLf adsorption protein III
Products: NA
Alternate protein names: Filamentous Phage PhiLf Adsorption Protein III
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGGSNSLYKGPDVVAESAGIYNA QATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSCDDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGG DGDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELY NKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCGGDFLAFLRAAGWVILAIAAY AALRIAVT
Sequences:
>Translated_328_residues MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGGSNSLYKGPDVVAESAGIYNA QATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSCDDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGG DGDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELY NKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCGGDFLAFLRAAGWVILAIAAY AALRIAVT >Mature_328_residues MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGGSNSLYKGPDVVAESAGIYNA QATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSCDDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGG DGDGGSDGGGDGGSDGGGDGGSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELY NKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCGGDFLAFLRAAGWVILAIAAY AALRIAVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31855; Mature: 31855
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGG CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECC SNSLYKGPDVVAESAGIYNAQATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSC CCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCC DDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGGDGDGGSDGGGDGGSDGGGDG CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH NKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCG CCCCCHHHHHHHHHCCCCCCCCEEECHHHHEECCCCCCCCEEECCCCCCCCEEEEEEECC GDFLAFLRAAGWVILAIAAYAALRIAVT HHHHHHHHHHHHHHHHHHHHHHHEEECC >Mature Secondary Structure MITVRLVACILAVALWSCAFSANAAMCRDAADACDQGQAFLAARMLADQRGVDLCKLVGG CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEECC SNSLYKGPDVVAESAGIYNAQATCSIGGPAGAGSTFYSKTCAQRPPLIGASSSDGSGFSC CCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCCCEECCCCCCCCCCC DDGCFYNFTVGASGGSGMYPSGATCSAGDAPPSTPGDDGGDGDGGSDGGGDGGSDGGGDG CCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSDGGGDGGSDGGSDGGGDGDGDGDGDGDGDGDGDTPGDGDGTTPGQGEGGEGAPMSELY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH NKSGKTVESVLSKFNTQVRGTPMVAGITDFMTVPSGGSCPVFSLGASKWWNAMTINFHCG CCCCCHHHHHHHHHCCCCCCCCEEECHHHHEECCCCCCCCEEECCCCCCCCEEEEEEECC GDFLAFLRAAGWVILAIAAYAALRIAVT HHHHHHHHHHHHHHHHHHHHHHHEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA