Click here to switch to the map view.

The map label for this gene is 78048015

Identifier: 78048015

GI number: 78048015

Start: 2787641

End: 2788360

Strand: Reverse

Name: 78048015

Synonym: XCV2459

Alternate gene names: NA

Gene position: 2788360-2787641 (Counterclockwise)

Preceding gene: 78048016

Following gene: 78048014

Centisome position: 53.85

GC content: 57.5

Gene sequence:

>720_bases
ATGAGTCATGAAGATGCAGCCGTCCAGGCTAGCCCATTACCCGAACAGTCCCTGCTATCAGTGCGGGGGAGCGCAGTTTC
AGACGTTGAACGCGTGCGATGCGAAGTTGACGGTCTGCACCGATTGCGGCGTGCTGATCTCGAAGCGCAGGGATATGCAG
AGCTCTTACAGCGTATGCAGTGGCAACAGTTCTGGACACTTACGTTCCGCATCGAAGAAGCCGGCCGAACTGGTGGTGTC
CACCCGGAAAAGGCTGATAAAGCGTTCCGATTCTTCGCCAGCTGTATCAACCGGGAAATATACGGGCCGAAGTGGAGCAC
CAAATCGCACGGCGGTATCCAGTGGGCACGGGGGCAAGAGTTCCACAAAGACGGCCGATTGCATTTCCACGCCGTCGCAG
CTGCACCTACCGATGATTTAAACCGGCTCATGAGCCGCTATCAGTGGCATGAGTTTTGGTTCAAAGAATTCGGACGTAAT
CGCATAGAGGCACCGCGCAGCCAATTGGATATCACCGGCTACGTGTCGAAGTACGTAACGAAGGGGGGAGTGGTGGACGT
GTCGAAGAACTTCGGCGCCTGGACCCCACCACCGATCGACTACACGCGCCGCCCGGTGCAGGCCGAGTTCGATCAAACAA
CGCGCAAGGGGAGTATCGAAGCATTGAACCGGGGTGTAGGGGCAGCGCCCCTACGGACTGGTCAACGAAAACGCCGGTGA

Upstream 100 bases:

>100_bases
CTGATCGAGCTGAAAAAGAAAGCCGAAACCGACGACGAACGCGCCGAGCTAGACCGACTGATAGAGGAACGCATCAGGTG
GGTAGGCTCGGGGCAGGGCG

Downstream 100 bases:

>100_bases
TCGTTCACCGGGACATGCAGTAACGCCCCCGGTCTGGGAGGCACCGAAGCCGCAGCCTGTTCGCCTACGCGCAACCAGCA
CGGCAACGCCAGGAATCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MSHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQWQQFWTLTFRIEEAGRTGGV
HPEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQEFHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRN
RIEAPRSQLDITGYVSKYVTKGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR

Sequences:

>Translated_239_residues
MSHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQWQQFWTLTFRIEEAGRTGGV
HPEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQEFHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRN
RIEAPRSQLDITGYVSKYVTKGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR
>Mature_238_residues
SHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQWQQFWTLTFRIEEAGRTGGVH
PEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQEFHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRNR
IEAPRSQLDITGYVSKYVTKGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27341; Mature: 27210

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQ
CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WQQFWTLTFRIEEAGRTGGVHPEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQE
HHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
FHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRNRIEAPRSQLDITGYVSKYVT
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHH
KGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR
CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SHEDAAVQASPLPEQSLLSVRGSAVSDVERVRCEVDGLHRLRRADLEAQGYAELLQRMQ
CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
WQQFWTLTFRIEEAGRTGGVHPEKADKAFRFFASCINREIYGPKWSTKSHGGIQWARGQE
HHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCC
FHKDGRLHFHAVAAAPTDDLNRLMSRYQWHEFWFKEFGRNRIEAPRSQLDITGYVSKYVT
CCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHH
KGGVVDVSKNFGAWTPPPIDYTRRPVQAEFDQTTRKGSIEALNRGVGAAPLRTGQRKRR
CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA