Click here to switch to the map view.

The map label for this gene is 78047993

Identifier: 78047993

GI number: 78047993

Start: 2769101

End: 2770156

Strand: Reverse

Name: 78047993

Synonym: XCV2437

Alternate gene names: NA

Gene position: 2770156-2769101 (Counterclockwise)

Preceding gene: 78047997

Following gene: 78047991

Centisome position: 53.49

GC content: 68.66

Gene sequence:

>1056_bases
ATGGCAAGGTCCGGGTTGTACAAAAGCGATGTGCAACGCGCCCGCGATCGCCTGCGCGCCACGGGCACGCATCCGTCCGT
GGACGCGGTCCGGGTGGCGCTCGGCAATACGGGGTCCAAGACCACCATCCACCGCTATTTGAGGGAATTGGAAGAGGAGG
AAGGGCAAGGCGTTGGCGCGAAGATGGCCGTGAGCGACGCACTTCAAGACCTCATCGCCCGCCTCGCCGAGCGGTTGCAC
AGCGAGGCCGACACGGTCGTGGCGCAGGCCCAGGCGCGCTTCCAGGCGCAGCTGCAGGAACGCACCCAAGCGCTGGAGCA
GGCCCGGCAGGAGGCCGGCTCGCTCAGGACGCAGCTGCAACGCTGCGAGACCGCGCTGCAGGCCGAACGCGAGGCGGGCG
ACGCTGCCAGGAGCGAGGTGGCCAGCTGCGCTACCGAGCTAGCTCAGCTGGAGGAGCGGATCGCGGGCCTCACGGCGCGA
TTGGCCGAGCACGACGCCCATGCGAAATCCTTGGAACACAAGCACGAACACGCCAGGGAAGCCCTGGAGCACTACCGCAC
CTCGGTCAAGGACCAGCGTGAGCAGGAACAGCGCCGGCACGCGCACCAGGTGCAGGAGTTGCAGGTCGCCCTACGGCAGG
CCAACGAGGCGCTGACCGCCAAGAATCACGACCTGATACAGCTCAACCGGGAAAACGGCCAGTGGCTGGAACGCCAGACC
CGGCTGGAGCGGGAACTGGCGCAGGCACGCCAGCGGGCCGACGCCCAGCAACGCGAGCGCGACGCGCTGCGCCTGACGGC
CGCCGAGCACCAAGCCCTGCAGGTGCGCTGGACCCAAGATGTCCATGCGCTGGAAGGCGTGCGCGCCGAACTGGCTGCGG
CGCGGACCGAACTGGTCGAAGAGCGCCAGCGCCGGGAACACGCCGAGGCGGACACCTTGCGGGCCACGGTGCGCCTGAGC
ACGTTGGAACAACTCCTGGCGCGGCTGCGGCCAGTGCACTCCGTTGGCGAACCCGAAAACGCCATCTCAGCCGGTGCAAT
GCCGGCAGGCAGATGA

Upstream 100 bases:

>100_bases
TCCCGCGTGAGCTCAACGCCTATCGACGGTCCCGTGTAATGCGTTGAGGAGTATGTAATTACATGGTATGTAATACGTTA
CGAAATACGTGGAGTGCCGG

Downstream 100 bases:

>100_bases
TCAGCCGCTTGGCGAAGGCTCGGGAATCCTCCACGTCAGTGCCTTCGTCGTCCCAGCCAGGATTTCGGTGAGGCGGAGCG
AATCGGAAAGTTCCCCTCTA

Product: putative cointegrate resolution protein T

Products: NA

Alternate protein names: TnpT Protein; Integrase-Like Protein; Phage Cointegrase Resolution Protein; Transposon Cointegrate Resolution Protein; Cointegrase; Citron Protein

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGAKMAVSDALQDLIARLAERLH
SEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQRCETALQAEREAGDAARSEVASCATELAQLEERIAGLTAR
LAEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLIQLNRENGQWLERQT
RLERELAQARQRADAQQRERDALRLTAAEHQALQVRWTQDVHALEGVRAELAAARTELVEERQRREHAEADTLRATVRLS
TLEQLLARLRPVHSVGEPENAISAGAMPAGR

Sequences:

>Translated_351_residues
MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGAKMAVSDALQDLIARLAERLH
SEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQRCETALQAEREAGDAARSEVASCATELAQLEERIAGLTAR
LAEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLIQLNRENGQWLERQT
RLERELAQARQRADAQQRERDALRLTAAEHQALQVRWTQDVHALEGVRAELAAARTELVEERQRREHAEADTLRATVRLS
TLEQLLARLRPVHSVGEPENAISAGAMPAGR
>Mature_350_residues
ARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGAKMAVSDALQDLIARLAERLHS
EADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQRCETALQAEREAGDAARSEVASCATELAQLEERIAGLTARL
AEHDAHAKSLEHKHEHAREALEHYRTSVKDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLIQLNRENGQWLERQTR
LERELAQARQRADAQQRERDALRLTAAEHQALQVRWTQDVHALEGVRAELAAARTELVEERQRREHAEADTLRATVRLST
LEQLLARLRPVHSVGEPENAISAGAMPAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39477; Mature: 39346

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGA
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH
KMAVSDALQDLIARLAERLHSEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCETALQAEREAGDAARSEVASCATELAQLEERIAGLTARLAEHDAHAKSLEHKHEHARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEHYRTSVKDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLIQLNRENGQWLERQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
RLERELAQARQRADAQQRERDALRLTAAEHQALQVRWTQDVHALEGVRAELAAARTELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQRREHAEADTLRATVRLSTLEQLLARLRPVHSVGEPENAISAGAMPAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC
>Mature Secondary Structure 
ARSGLYKSDVQRARDRLRATGTHPSVDAVRVALGNTGSKTTIHRYLRELEEEEGQGVGA
CCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCH
KMAVSDALQDLIARLAERLHSEADTVVAQAQARFQAQLQERTQALEQARQEAGSLRTQLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RCETALQAEREAGDAARSEVASCATELAQLEERIAGLTARLAEHDAHAKSLEHKHEHARE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEHYRTSVKDQREQEQRRHAHQVQELQVALRQANEALTAKNHDLIQLNRENGQWLERQT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHH
RLERELAQARQRADAQQRERDALRLTAAEHQALQVRWTQDVHALEGVRAELAAARTELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERQRREHAEADTLRATVRLSTLEQLLARLRPVHSVGEPENAISAGAMPAGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA