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The map label for this gene is alpA [C]

Identifier: 78047971

GI number: 78047971

Start: 2739142

End: 2739354

Strand: Reverse

Name: alpA [C]

Synonym: XCV2415

Alternate gene names: 78047971

Gene position: 2739354-2739142 (Counterclockwise)

Preceding gene: 78047972

Following gene: 78047970

Centisome position: 52.9

GC content: 61.03

Gene sequence:

>213_bases
ATGTCGCAAACACCTGTACTGCCACCCAACGAGCGCCGCATTCTGCGTCTGGAAGAAGTCGAAGCGAAGTCCGGCTTCAA
GCGTGCCCACATCTACAACCTGATGAAGAAGCGCCAGTTCCCGCAGGCGCTGCGCCTGGGTGTGCGCGCCGTCGGCTGGG
ATTCCATCGAAATCGATCAGTGGATCGCCGAGCGCGTCAACAACCGGGCCTGA

Upstream 100 bases:

>100_bases
TGCAGTCGCGGAGATTGCATTTGCAATGTCTTTCCGCAGCCGTGTCTATTGAATAGAGGTCACGCCAACAAACGCCACTG
AGCGTTCAGGAGTGACCGCC

Downstream 100 bases:

>100_bases
CCCGTTCTCCCGCGGACCTTCCATCCTCACACGGAGAACGCCATGCAGGTTGTATCCATCATTTCAACGAAAGGTGGCGT
CGGCAAGACCACCACGGCCG

Product: AlpA family regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator; Phage-Like Protein; Phage Transcriptional Regulator; Phage-Related Protein

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MSQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERVNNRA

Sequences:

>Translated_70_residues
MSQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERVNNRA
>Mature_69_residues
SQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQWIAERVNNRA

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8229; Mature: 8097

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQ
CCCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHH
WIAERVNNRA
HHHHHHCCCC
>Mature Secondary Structure 
SQTPVLPPNERRILRLEEVEAKSGFKRAHIYNLMKKRQFPQALRLGVRAVGWDSIEIDQ
CCCCCCCCCCCEEEHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHH
WIAERVNNRA
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA