Click here to switch to the map view.

The map label for this gene is 78047965

Identifier: 78047965

GI number: 78047965

Start: 2733419

End: 2734201

Strand: Reverse

Name: 78047965

Synonym: XCV2409

Alternate gene names: NA

Gene position: 2734201-2733419 (Counterclockwise)

Preceding gene: 78047966

Following gene: 78047964

Centisome position: 52.8

GC content: 67.69

Gene sequence:

>783_bases
ATGGCAACCACCAACGAACCCCTGCAACTGAATCTCGGCTCCTTGCGCAGCGCGATGTCGCTGACGCTGCACACGCACCA
CGCCTCGCGCATCTGGCACGGCCGCGCCGCCGCCGAGGGACGACCGGGCATCGTCGGCCTGAACGGCTACATCGCCCAGA
TGAACAAGATGCGGCGCGGCTCGGAGCAGGACGACCCGTACAGCGACTTCTGGATGCTGCGCATCGAGGACAAGCTCGAC
CAGACCAAGGCCACGCTGCAATCGCTGCGCGAGCAGGTGGACCAGGCTCTCGCGAGCGTGCCGCCGGCACTCACCCTGGG
CGAGAACCTCAACGTACAGCCCGTCAAGCTGCCGCTGTTCGTCAATGCGCAGCTCGGCTTTGCCGCCGTTTATCTGCTCG
CCGACTACGACGACATCGCCCGCAAGCTGATCCTCGCGCACCACACTGCGCTGATCGATCGCTCGACGCTCGAACGCTGG
CTCAACGAAGGCGCCCATGCACTGCGCAGCCTGTTCTCGCTGGCCCAGCAGTACCGCTACTCGGGCTGCACCCGCGACGA
CTTCGCCGCGAAGAACGCCGCAGCCCGGGCGGCGCTGGAGAAATTCGGCGAGTTGCCGCAGGACGTGCTGGAAGGCACGC
GCCGCTCGAAGTTCGCGCCGCCCATCGTGCGCCGTGGCCTGCAGCAGCGCGGTGACGGTCCTGCCGCAGCACCATCCGCC
AGTGACGAAGCCGCCGCCACCGAGGCCTCCGAAGCGACAGCCGGCGAGGACGAGCAGGCATGA

Upstream 100 bases:

>100_bases
CGCGCCCTGAACCGGGGACGGGCGGGTTTCGGTTTGTTGACTGACTGCCTTCCGCTTCCTGCCGAAGCTGGCCGCTCTTT
TCCAACAACGAGCGGACACC

Downstream 100 bases:

>100_bases
GCGACCCGAATCGCGAAACCCGCTACTTCCGTCCCCTGCAACAGACCGCCTTCATGAGGCTGGAACACGCAGGCTCTCAA
AAAGGCCTTTTAAAACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MATTNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAQMNKMRRGSEQDDPYSDFWMLRIEDKLD
QTKATLQSLREQVDQALASVPPALTLGENLNVQPVKLPLFVNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERW
LNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKFGELPQDVLEGTRRSKFAPPIVRRGLQQRGDGPAAAPSA
SDEAAATEASEATAGEDEQA

Sequences:

>Translated_260_residues
MATTNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAQMNKMRRGSEQDDPYSDFWMLRIEDKLD
QTKATLQSLREQVDQALASVPPALTLGENLNVQPVKLPLFVNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERW
LNEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKFGELPQDVLEGTRRSKFAPPIVRRGLQQRGDGPAAAPSA
SDEAAATEASEATAGEDEQA
>Mature_259_residues
ATTNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAQMNKMRRGSEQDDPYSDFWMLRIEDKLDQ
TKATLQSLREQVDQALASVPPALTLGENLNVQPVKLPLFVNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERWL
NEGAHALRSLFSLAQQYRYSGCTRDDFAAKNAAARAALEKFGELPQDVLEGTRRSKFAPPIVRRGLQQRGDGPAAAPSAS
DEAAATEASEATAGEDEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28415; Mature: 28284

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAQMNKMRRG
CCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCC
SEQDDPYSDFWMLRIEDKLDQTKATLQSLREQVDQALASVPPALTLGENLNVQPVKLPLF
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEE
VNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERWLNEGAHALRSLFSLAQQYRY
EECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGCTRDDFAAKNAAARAALEKFGELPQDVLEGTRRSKFAPPIVRRGLQQRGDGPAAAPSA
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
SDEAAATEASEATAGEDEQA
CCHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
ATTNEPLQLNLGSLRSAMSLTLHTHHASRIWHGRAAAEGRPGIVGLNGYIAQMNKMRRG
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHHHHHHHHCC
SEQDDPYSDFWMLRIEDKLDQTKATLQSLREQVDQALASVPPALTLGENLNVQPVKLPLF
CCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEE
VNAQLGFAAVYLLADYDDIARKLILAHHTALIDRSTLERWLNEGAHALRSLFSLAQQYRY
EECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGCTRDDFAAKNAAARAALEKFGELPQDVLEGTRRSKFAPPIVRRGLQQRGDGPAAAPSA
CCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCC
SDEAAATEASEATAGEDEQA
CCHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA