| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047933
Identifier: 78047933
GI number: 78047933
Start: 2704206
End: 2706398
Strand: Reverse
Name: 78047933
Synonym: XCV2377
Alternate gene names: NA
Gene position: 2706398-2704206 (Counterclockwise)
Preceding gene: 78047934
Following gene: 78047932
Centisome position: 52.26
GC content: 66.44
Gene sequence:
>2193_bases ATGTCGGGGAAACAGCCAGTTGAGGTACTGCTTCGCCCAGCGGTGGAGCTATATACCGTCGCGGCGTGTGCAGGCGCCGC GTTTCTGTCCCTGGTGGCACCCTGGTCGCTCGCGCTGAGCCCCGCCATGGGCGTCGGCAGCGCGCTGGCGTTCGGGGCCT ACGGCGCCATCCGCTACCGCGATGCCCGGGTCATCCTGCGCTACCGGCGCAACATCCGCCGCCTGCCGCGCTACGTGATG ACCAGCAGGGACGTGCCGGTCAGCCAGCAGCGGCTGTTCGTGGGGCGTGGGTTCTTGTGGGAGCAGAAGCATACCCATAG GCTCATGCAGACGTACCGGCCGGAGTTCCGCCGCTACGCCGAGCCGACACCGGCCTACCGGCTGGCGCGTCGCCTGGAAG AACGGCTGGAGTTCGCCCCGTTCCCGCTGTCCCGGCTGCCTGCGCTCACCGGCTGGGACGTGCCTTTCAACCCGGTGCGG CCGCTGCCGCCTGTTGGCGGCCTGCCGCGCCTGCACGGCATCGAACCCGACGAGGTGGACGTCAGCCTGCCGCTGGGCGA GCGCGTCGGGCACTCGCTGGTGCTGGGCACTACGCGCGTAGGCAAGACGCGACTGGCCGAGTTGTTCGTGACCCAGGACA TCCGGCGCAAGAACGCCGCGGACGAGCACGAGGTCGTGATCGTCATCGATCCCAAGGGGGACGCGGACCTGCTCAAGCGG ATGTACGTCGAGGCCAAGCGAGCGGGCCGCGAGCGCGAGTTCTACGTCTTCCATTTGGGCTGGCCGGACATTTCCGCGCG CTACAACGCCGTGGGCCGCTTCGGCCGCATCAGCGAGGTGGCCACCCGCGTCGCGGGGCAGCTTTCCGGCGAAGGCAACT CAGCCGCCTTCCGAGAGTTTGCGTGGCGATTCGTCAACATCATCGCCCGCGCCCTGGTGGAGCTGGGACAGCGGCCCGAC TACATGCTGATCCAGCGGCACGTCATCAACATCGACGCGCTGTTCATCGAGTACGCCCAGCACTACTTCGCCAAGACGGA GCCCAAGGCCTGGGAGGTGATCGTCCAGATCGAGGCCAAGCTCAACGAGAAGAACATCCCGCGCAACATGATCGGGCGCG AGAAGCGCGTGGTGGCGCTGGAGCAGTACCTCTCGCAGGCGCGCAACTACGACCCGGTGCTGGATGGCCTGCGCTCGGCG GTTCGCTACGACAAGACGTACTTCGACAAGATCGTCGCATCGCTGCTTCCGCTGCTGGAGAAGCTGACAAGCGGCAAGAT CGCCCAGCTCCTGGCCCCGAACTATTCCGACCTGACCGACCCGCGCCCGATCTTCGACTGGATGCAGATCATCCGTAAGA GGGCCATCGTCTATGTGGGCCTGGACGCGCTGTCCGACGCCGAGGTCGCCGCAGCGGTGGGCAACTCGATGTTCAGCGAT CTCGTGTCGGTCGCCGGGCACATCTACAAGCACGGGATCGACGATGGCCTGCCGGGAGCATCGGCCGGTGCGCGCGTGCC GATCAATGTCCATGCCGACGAGTTCAACGAGTTGATGGGCGACGAGTTCATCCCGCTCATCAACAAAGGCGGCGGTGCCG GCCTGCAAGTCACGGCCTACACGCAGACCCTCTCGGACATCGAGGCCCGCATCGGCAACCGCGCCAAGGCCGGTCAGGTG ATCGGAAATTTCAACAATTTGTTCATGCTGAGGGTCAGGGAGGCCGCGACGGCCGAACTCCTAACGAGGCAGTTGCCGAA GGTCGAGGTCTATACGACCACCATCGTGAGCGGCGCGACCGACAGCTCGGACATTCGCGGGGCGACGGATTTCACGTCGA ACACCCAGGACCGCATCAGCATGTCCAGCGTGCCGATGATCGAGCCGTCGCATGTCGTCGGCCTGCCCAAGGGCCAGTGC TTCGCGCTGCTGCAGGGCGGCCAGCTTTGGAAAGTGCGCATGCCGCTGCCGGCGCCGGACCCGGACGAGGTGATGCCGGC AGACTTGCAGCAACTGGCCGGGTACATGCGCCAGAGCTACAGCGAAGCGACGCAGTGGTGGGAGTTCACCAGCTCCCCGG CCTTGCAGGAGACAGGCCTGCCCGACGACCTGCTGGATGACGCCGCTCCGGCCGAACCTCCCGCGGTGGCCACCGTCAGC GACGATGGCGCCGGCAACGAGGCCTCGCAATGA
Upstream 100 bases:
>100_bases GTGCCGCTCGCACCCGTGTCCGGCGACGACCTGGCCGAGCGCCTGGGCCTGCAGCACTACCCGGCGCTGATCACGGCCAC CGGCATCGAGCAATGAAGCC
Downstream 100 bases:
>100_bases AGGACGCCGCCTCGACTGCGCAGAGGGAGCAGAACCAGCGCCAGGGCCTGATCGTCGGCACCATCACCTTGCCGTTCCGG CTGCTCGGGGTACTGATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYRDARVILRYRRNIRRLPRYVM TSRDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYAEPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVR PLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNAADEHEVVIVIDPKGDADLLKR MYVEAKRAGREREFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD YMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSA VRYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLTDPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV IGNFNNLFMLRVREAATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQC FALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQETGLPDDLLDDAAPAEPPAVATVS DDGAGNEASQ
Sequences:
>Translated_730_residues MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYRDARVILRYRRNIRRLPRYVM TSRDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYAEPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVR PLPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNAADEHEVVIVIDPKGDADLLKR MYVEAKRAGREREFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPD YMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSA VRYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLTDPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQV IGNFNNLFMLRVREAATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQC FALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQETGLPDDLLDDAAPAEPPAVATVS DDGAGNEASQ >Mature_729_residues SGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYRDARVILRYRRNIRRLPRYVMT SRDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYAEPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVRP LPPVGGLPRLHGIEPDEVDVSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNAADEHEVVIVIDPKGDADLLKRM YVEAKRAGREREFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREFAWRFVNIIARALVELGQRPDY MLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAKLNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAV RYDKTYFDKIVASLLPLLEKLTSGKIAQLLAPNYSDLTDPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSDL VSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAYTQTLSDIEARIGNRAKAGQVI GNFNNLFMLRVREAATAELLTRQLPKVEVYTTTIVSGATDSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCF ALLQGGQLWKVRMPLPAPDPDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQETGLPDDLLDDAAPAEPPAVATVSD DGAGNEASQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81017; Mature: 80885
Theoretical pI: Translated: 7.43; Mature: 7.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEH DARVILRYRRNIRRLPRYVMTSRDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEECHHHHHHHHHHHCHHHHHHC EPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVRPLPPVGGLPRLHGIEPDEVD CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNAADEHEVVIVIDPKGDADLLKR EECCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH MYVEAKRAGREREFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREF HHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTSGKIAQLLAPNYSDLTDPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD HHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAY HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEH TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVREAATAELLTRQLPKVEVYTTTIVSGAT HHHHHHHHHHHCCCCHHCHHHCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEEEEECCC DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPD CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCEEEEECCCCCCC PDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQETGLPDDLLDDAAPAEPPAVATVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCCEEEEEC DDGAGNEASQ CCCCCCCCCC >Mature Secondary Structure SGKQPVEVLLRPAVELYTVAACAGAAFLSLVAPWSLALSPAMGVGSALAFGAYGAIRYR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHCCCCEEEH DARVILRYRRNIRRLPRYVMTSRDVPVSQQRLFVGRGFLWEQKHTHRLMQTYRPEFRRYA HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEECCCCEECHHHHHHHHHHHCHHHHHHC EPTPAYRLARRLEERLEFAPFPLSRLPALTGWDVPFNPVRPLPPVGGLPRLHGIEPDEVD CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VSLPLGERVGHSLVLGTTRVGKTRLAELFVTQDIRRKNAADEHEVVIVIDPKGDADLLKR EECCCHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH MYVEAKRAGREREFYVFHLGWPDISARYNAVGRFGRISEVATRVAGQLSGEGNSAAFREF HHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHH AWRFVNIIARALVELGQRPDYMLIQRHVINIDALFIEYAQHYFAKTEPKAWEVIVQIEAK HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEC LNEKNIPRNMIGREKRVVALEQYLSQARNYDPVLDGLRSAVRYDKTYFDKIVASLLPLLE CCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLTSGKIAQLLAPNYSDLTDPRPIFDWMQIIRKRAIVYVGLDALSDAEVAAAVGNSMFSD HHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHH LVSVAGHIYKHGIDDGLPGASAGARVPINVHADEFNELMGDEFIPLINKGGGAGLQVTAY HHHHHHHHHHHCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCHHEECCCCCCEEEEEH TQTLSDIEARIGNRAKAGQVIGNFNNLFMLRVREAATAELLTRQLPKVEVYTTTIVSGAT HHHHHHHHHHHCCCCHHCHHHCCCCCEEEEEEHHHHHHHHHHHHCCCEEEEEEEEEECCC DSSDIRGATDFTSNTQDRISMSSVPMIEPSHVVGLPKGQCFALLQGGQLWKVRMPLPAPD CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCEECCCCCCEEEEEECCCEEEEECCCCCCC PDEVMPADLQQLAGYMRQSYSEATQWWEFTSSPALQETGLPDDLLDDAAPAEPPAVATVS CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHCCCCCCCCEEEEEC DDGAGNEASQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA