| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047923
Identifier: 78047923
GI number: 78047923
Start: 2695658
End: 2698525
Strand: Reverse
Name: 78047923
Synonym: XCV2367
Alternate gene names: NA
Gene position: 2698525-2695658 (Counterclockwise)
Preceding gene: 78047924
Following gene: 78047922
Centisome position: 52.11
GC content: 66.18
Gene sequence:
>2868_bases ATGCGCTGGAAACTTCCCTGGCCGAAGCTGGCCGCATCCAGCGCCAGCGACGACGAGCAGCCGGACGGTTGGCAGCGCCA CGTCGATGCCTTGCGCCAGGCCGGCATCCCCGAACCTGGCGCAGCGGTCCAGGGCCGCAGGCCGGCGACGGTAGCCGACG AGCAGGCGCTGTACGACGTCGCACCGTCGTTCGCGGAACTGCTGCCTTGGGTGGAGTTCCTGCCGCAGTCGAAGTCCATG CTGCTGGAGGATGGGCAGTCGGTCGCTGCCTTCTACGAGCTGGTGCCGCTGGGCACCGAGGGCCGGGAACCCGGCTGGCT TGCGCATGCCCGCGATGCCTTGGAGAACGCGCTCCAGGACTCGTTCGATGAGCTGGACGAAAACCCCTGGGTGCTCCAGC TCTACGCCCAGGACGAGCCCAGCTTCGACCAGTACATGCAGACCCTGCGCGACTATGTGCAGCCGCGCGCCCGGGATACC GCGTTCACCGAATTCTACCTGCGCTTCTTCGGCCACCATCTGCGCGCGGTCGCCAAGCCGGGCGGCCTGTTCGAGGACAC GGTAGTCACGCGGCTGCGCTGGCGCGGCCAGACGCGGCGGGTGCGCATGGTGATCTATCGCCGTGCCACCGGGCAGGCAA GCCGCCGCGGCCAGACACCCGAGCAGATGCTGAACATCGTCTGCGACCGCCTGTGCGGCGGCTTGGCGAACGCCGGCATC CAGGCACGGCGCATGGTCGCAGCCGACGTCCACGACTGGCTGCTGCGGTGGTTCAATCCGCGCCCCGCGATGCTCGGGCC GAGTGCAGAGGACCGGGAGCGCTTCTACGCGCTGGCGCGCTACCCCGACGAGACCGAGGAAGGCGAAATCGAGCTGGCGA GCGGGCGGGATTTCAGCCAGCGGTTGTTCTTCGGCCAGCCACGCTCCGACGTGGAGCACGGCACCTGGTACTTCGACGGC ATGCCGCACCGTGTGCTGATCACCGACCGGCTCCGCATGCCGCCCGCCACGGGTCACCTGACGGGCGAAACCCGCAAGGG CGATGCGATCAACACCCTGTTCGACCAGATGCCGGAAGACACCTTGATGTGTCTCACCATGGTCGCCACACCGCAGGATG TGCTGGAAGCGGACTTGAACCACCTGGCGAAGAAGGCCGTGGGCGAGACGCTGGCGTCGGAGCAGACGCTCAAGGACGTG CAGGAGGCGCGGTCCCTGATCGGCAGCGCGCACAAGCTCTACCGGGGAACGCTGGCGTTCTACCTGCGCGGGCGCGACGA GGCGGAACTGGACCGGCGCGGCCTGGACCTGGCGAACGTGATGCTCAACGCCGGCTTGCAGCCGGTGCGCGAGGACGACG AGGTGGCGCCACTCAACAGCTACTTGCGCTGGCTGCCGTGCTGCTACAACCCCGGCCAGGATCGGCGCAGGTGGTACACC CAACTGATGTTCGCGCAGCACATCGCGAACGTATCGCCGGTGTGGGGCCGCGCCCAGGGTACCGGGCATCCCGGCATCAC CGTGTTCAACCGCGGCGGCGGCCCGATCACGTTCGATCCGCTCAACCGCCTAGACCGACAGATGAACGCCCACTTGTTCC TGTTCGGCCCCACCGGCTCCGGCAAGAGCGCCACGCTCAACAACCTATTGAATCAGGTCACGGCCATCTACCGGCCAAGG CTGTTCATCGTGGAAGCCGGCAACAGCTTCGGCCTGTTCAGCGACTTCGCCAAGCGCCTGGGCCTGACCGTGAACCGGGT CAAGCTGGCCCCCGGCTCGGGCATCAGCCTGGCCCCCTTCGCCGACGCGCGCCGGCTGATCGAGACGCCCAGCGACGTGC AGACGCTCGATGCCGATGCGCTGGACGAAGACCTGCCACCGGATGTCGCGGCGATGGAGGCAGACGAGCAGCGCGACGTG CTGGGCGAACTGGAGATCACGGCACGGCTGATGATCACCGGCGGCGAGGACAAGGAAGAAGCCCGGATGACGCGGGCCGA TCGCTCGCTTATCCGCCAGTGCATCCTCGACGCCGCCGAGCACTGCGTGGCCGAGAAGCGCACGGTGCTCACGCGCGACG TGCGCAATGCACTGCGCACCCGCGGCCAGGACCCAACGCTGCCCGAGATGCGCCGCGTGCGACTGCTGGAAATGGCGGAT GCGATGGATATGTTCTGCCAAGGCACAGATGGCGAGATGTTTGACCGCGACGGCACACCATGGCCGGAAGCCGACATCAC CCTGGTCGATCTGGCGACCTACGCCCGCGAGGGCTACAACGCACAGCTCTCCATCGCCTATATCAGCCTGATCAGCACGG TGAACAACATCGCCGAACGCGACCAGTATTTGGGGCGCCCGATCATCAATGTGACCGACGAAGGACACATCATCACGAAG AATCCGCTGCTCGCGCCCTACGTCGTGAAAATTACAAAGATGTGGAGGAAATTGGGGGCCTGGTTCTGGCTCGCGACGCA GAACATCGACGACCTGCCACGCGCCGCGGAGCCAATGCTCAACATGATCGAGTGGTGGATCTGCCTCAGCATGCCACCCG ATGAAGTCGAGAAGATCGCGCGGTTCCGCGAACTCTCGCCCGCGCAGAAGGCGCTGATGCTGTCGGCCCGCAAGGAGGCG GGCAAGTTCACCGAGGGAGTCATCCTCTCCAAGAGCATGGAAGTGCTGTTCCGCGCCGTGCCGCCAAGCCTGTACCTCGC GCTTGCGCAGACCGAACCCGAAGAGAAGGCCGAGCGCTACCAGCTCATGCAGCAATACGGCTGCACCGAACTGGAAGCGG CCTTCAAGGTAGCCGAGAAGATCGACCAAGCACGCGGCATCGAGTCGCCGGCCTTGGAACTGTCGTAA
Upstream 100 bases:
>100_bases CGGGCTCGGACCCTGTACCTGTGCCGGGCTACACGACGGTCTTCCCCCTCTATCAGCGCGTGCAGTACGCCATGCCGGGC GAGCGCGTGGAGGAATACTG
Downstream 100 bases:
>100_bases GCCGGAGAACGCCATGGAACCGAAACGTCCCTCCATCCCGATGCAGGTCCAGGCGTTCCGCCGTCGCAATCGGCGGCTCC GCTGGCCTTGGGTATTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 955; Mature: 955
Protein sequence:
>955_residues MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDVAPSFAELLPWVEFLPQSKSM LLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDT AFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQRLFFGQPRSDVEHGTWYFDG MPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDV QEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTAIYRPR LFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDV LGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRVRLLEMAD AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIINVTDEGHIITK NPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEA GKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALELS
Sequences:
>Translated_955_residues MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDVAPSFAELLPWVEFLPQSKSM LLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDT AFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQRLFFGQPRSDVEHGTWYFDG MPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDV QEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTAIYRPR LFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDV LGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRVRLLEMAD AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIINVTDEGHIITK NPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEA GKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALELS >Mature_955_residues MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDVAPSFAELLPWVEFLPQSKSM LLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQDSFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDT AFTEFYLRFFGHHLRAVAKPGGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQRLFFGQPRSDVEHGTWYFDG MPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPEDTLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDV QEARSLIGSAHKLYRGTLAFYLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGSGKSATLNNLLNQVTAIYRPR LFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPFADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDV LGELEITARLMITGGEDKEEARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRVRLLEMAD AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAERDQYLGRPIINVTDEGHIITK NPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPMLNMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEA GKFTEGVILSKSMEVLFRAVPPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALELS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107641; Mature: 107641
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDV CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH APSFAELLPWVEFLPQSKSMLLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQD HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH SFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDTAFTEFYLRFFGHHLRAVAKP HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC GGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCH QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHH RLFFGQPRSDVEHGTWYFDGMPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPED HHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCH TLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDVQEARSLIGSAHKLYRGTLAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT EEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGS HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECHHHHHHHHCCCEEEEECCCCC GKSATLNNLLNQVTAIYRPRLFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPF CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCH ADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDVLGELEITARLMITGGEDKEE HHHHHHHCCCCHHHHCCHHHCCCCCCCCHHHHCCCHHHHHHHHEEEEEEEEEECCCCHHH ARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRVRLLEMAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAER HHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH DQYLGRPIINVTDEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPML HHHHCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH NMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEAGKFTEGVILSKSMEVLFRAV HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALELS CHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRWKLPWPKLAASSASDDEQPDGWQRHVDALRQAGIPEPGAAVQGRRPATVADEQALYDV CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHH APSFAELLPWVEFLPQSKSMLLEDGQSVAAFYELVPLGTEGREPGWLAHARDALENALQD HHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH SFDELDENPWVLQLYAQDEPSFDQYMQTLRDYVQPRARDTAFTEFYLRFFGHHLRAVAKP HHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC GGLFEDTVVTRLRWRGQTRRVRMVIYRRATGQASRRGQTPEQMLNIVCDRLCGGLANAGI CCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCH QARRMVAADVHDWLLRWFNPRPAMLGPSAEDRERFYALARYPDETEEGEIELASGRDFSQ HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCHHH RLFFGQPRSDVEHGTWYFDGMPHRVLITDRLRMPPATGHLTGETRKGDAINTLFDQMPED HHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCH TLMCLTMVATPQDVLEADLNHLAKKAVGETLASEQTLKDVQEARSLIGSAHKLYRGTLAF HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE YLRGRDEAELDRRGLDLANVMLNAGLQPVREDDEVAPLNSYLRWLPCCYNPGQDRRRWYT EEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHH QLMFAQHIANVSPVWGRAQGTGHPGITVFNRGGGPITFDPLNRLDRQMNAHLFLFGPTGS HHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEECHHHHHHHHCCCEEEEECCCCC GKSATLNNLLNQVTAIYRPRLFIVEAGNSFGLFSDFAKRLGLTVNRVKLAPGSGISLAPF CCHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHCCEEEEEEECCCCCCCCCCH ADARRLIETPSDVQTLDADALDEDLPPDVAAMEADEQRDVLGELEITARLMITGGEDKEE HHHHHHHCCCCHHHHCCHHHCCCCCCCCHHHHCCCHHHHHHHHEEEEEEEEEECCCCHHH ARMTRADRSLIRQCILDAAEHCVAEKRTVLTRDVRNALRTRGQDPTLPEMRRVRLLEMAD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AMDMFCQGTDGEMFDRDGTPWPEADITLVDLATYAREGYNAQLSIAYISLISTVNNIAER HHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHH DQYLGRPIINVTDEGHIITKNPLLAPYVVKITKMWRKLGAWFWLATQNIDDLPRAAEPML HHHHCCCCEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH NMIEWWICLSMPPDEVEKIARFRELSPAQKALMLSARKEAGKFTEGVILSKSMEVLFRAV HHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC PPSLYLALAQTEPEEKAERYQLMQQYGCTELEAAFKVAEKIDQARGIESPALELS CHHHEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA