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The map label for this gene is ykfG [C]

Identifier: 78047921

GI number: 78047921

Start: 2694183

End: 2694677

Strand: Reverse

Name: ykfG [C]

Synonym: XCV2365

Alternate gene names: 78047921

Gene position: 2694677-2694183 (Counterclockwise)

Preceding gene: 78047922

Following gene: 78047920

Centisome position: 52.04

GC content: 57.17

Gene sequence:

>495_bases
ATGTCTCTCATCGTCAATGGCTCCTGCGTGGAGCCACGTTTTGCCCCAGCGTCCCAATCTGATGACCGGATCATCCGGCA
AGCCATCGCGCTGCTGGAACAGCGGATCTTCAAGAAGGGGCCATTCCTGGATGGGCCCACCGCTGTCAAGGATTACCTGC
GCCTGAAATTGGTCGCCGAGCCGAACGAAATCTTCGCTGTCGTTTTCCTCAACAACAAGCACGAGGTACTCGCCTACGAA
CCGATGTTCAAGGGCACGATCCATTCGGCCACGGTACATGCGCGCCCGATCATGCAGCGTGCCCTGGAACTGAACGCCGC
AGCCGTCATTTTTTCGCACCAACATCCTTCTGGCTGTACGGAGCCATCAAGCGCAGACTGCGCGATAACGCAAACATTGA
AGACTGCCTTGGCACTGATCGATGTGAGGGTGCTGGATCACCTCATCGTCGGCCAGGGTACACCGTACTCGTTCGCGGAA
TCCGACATGCTGTAG

Upstream 100 bases:

>100_bases
CGCTGCGCGGTGGTGGATGCAACTTGCTCCGCTGTTTCCATCCCCAGGAGGGCTTGCCCTCCCAGGGTGGCGCCTTCCGT
CTACATTCTGGAGGTTCGCC

Downstream 100 bases:

>100_bases
CAATGACATCGGCTCCTTGATCTATGCGGAGGCTTCGGCCTCCGCTTTTTCATGGGTGGAAGACAAGCAGGTATGCGGGC
AGTCCGCGATGCGCATTGTT

Product: RadC family DNA repair protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVKDYLRLKLVAEPNEIFAVVFLNNKHEVLAYE
PMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADCAITQTLKTALALIDVRVLDHLIVGQGTPYSFAE
SDML

Sequences:

>Translated_164_residues
MSLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVKDYLRLKLVAEPNEIFAVVFLNNKHEVLAYE
PMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADCAITQTLKTALALIDVRVLDHLIVGQGTPYSFAE
SDML
>Mature_163_residues
SLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVKDYLRLKLVAEPNEIFAVVFLNNKHEVLAYEP
MFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCTEPSSADCAITQTLKTALALIDVRVLDHLIVGQGTPYSFAES
DML

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI2367100, Length=153, Percent_Identity=43.7908496732026, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1788997, Length=142, Percent_Identity=45.0704225352113, Blast_Score=131, Evalue=2e-32,
Organism=Escherichia coli, GI87082300, Length=130, Percent_Identity=40, Blast_Score=119, Evalue=7e-29,
Organism=Escherichia coli, GI1788312, Length=141, Percent_Identity=41.8439716312057, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17998; Mature: 17867

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVKDYLRLKLVAE
CEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEC
PNEIFAVVFLNNKHEVLAYEPMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCT
CCEEEEEEEECCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCCC
EPSSADCAITQTLKTALALIDVRVLDHLIVGQGTPYSFAESDML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLIVNGSCVEPRFAPASQSDDRIIRQAIALLEQRIFKKGPFLDGPTAVKDYLRLKLVAE
EEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHEEEEEC
PNEIFAVVFLNNKHEVLAYEPMFKGTIHSATVHARPIMQRALELNAAAVIFSHQHPSGCT
CCEEEEEEEECCCCEEEEECCCCCCCCCCCEEHHHHHHHHHHHCCCEEEEEECCCCCCCC
EPSSADCAITQTLKTALALIDVRVLDHLIVGQGTPYSFAESDML
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA