| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047919
Identifier: 78047919
GI number: 78047919
Start: 2692630
End: 2693577
Strand: Reverse
Name: 78047919
Synonym: XCV2363
Alternate gene names: NA
Gene position: 2693577-2692630 (Counterclockwise)
Preceding gene: 78047920
Following gene: 78047918
Centisome position: 52.01
GC content: 65.19
Gene sequence:
>948_bases GTGACCCGACCATTCGACCTGTTGAGGCGCCTGCGCGCTGGCGTGGCGTCCGTGCTGCTACTCAGTGCCACCGGAAGCTA CGCCCTCGACACCGCCACCGTCGTCGGCTCGGTGGCATCGCCCGACTGCCTCGAATACCGGGTCGTCGGCATCTGCTACT GGCTCTACTGCACTTGGACCGGCTGCACCGTGCGCACGTCTATCAAGGTTCGCCACTACATCCCCGATGCCGTCGTCTCC AGCTACAGCAATACCGGCGAGAACCCCTGGGTCGAAGTCCGGGCGATGAGCACGCCCAACCCATCCGCCCAAGCAGGCGG CGACGGAACCACGAACGAAGACCACGAGAACGACCTCGCCAAGTTCAAGAACGCCGACGTGATCGGCCACCCTGGCGTCG AGGTGTTCAACCAGTTCGTCTCGTCGTCGGGCTACTTCTGCGAGGGCGCGGGTACGGCGTTCATGCCGTACTTGCTCAGC ACGCTGGATACGCTGGCCTGGCGCTACAACGTGCCCGAGATGGCCTACCCGGAAGCGCTGGTTCCAGGCATGCGCGAGGT CGGCGCACGCACCACGATGAACCTCTGGGGCAACGTGTATCCCCGTGGCGGCTTCCTGCACCAGACCGACGACCACAAAG CTGGTGCCGTGGTGGCCCAACGTGCAGGTGATGTTGTCACGCGCCGCGGGCAGATCCACGTCTATCAGCCGCTGCTCGCC GATTCGCGGCCCGGCTACTGGCCTGCCGGCGCGCTGGTGGAGGGCGACGCATCGACCGGGAAGTGGCAGGAACTCACGCC CGTTCTGTCCTCGTCCTGCACGGTTTTCCCGCGTAACGATTTCCTGACCCAGGCCCAGCAAGGCGACTACGCCTGGGCAT TGTGGCGGCCCTATGCCTGCTGCGAACGCAAGGGCCAGGTCTTCCTCGGCAGCGTCGATTTCAACTGA
Upstream 100 bases:
>100_bases GCATCCCGGCCGTCGTCGTAGACCAACGCTACGTGGTCTACGGCGAACCGGACGTGGCTCGCGCCGTCGCGCGCATCGAG CAGTACCGGAGGAACCAGCC
Downstream 100 bases:
>100_bases GGTGGCACCATGAAGATTCGTACCGCACTCAATCCGCTCTCCCGCCAGGCACGCCACACGAAGATCGTCCTGGCGCTGGC CGGCACGCTCGCGCTGGCCA
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTRPFDLLRRLRAGVASVLLLSATGSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSIKVRHYIPDAVVS SYSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENDLAKFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLS TLDTLAWRYNVPEMAYPEALVPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLA DSRPGYWPAGALVEGDASTGKWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWALWRPYACCERKGQVFLGSVDFN
Sequences:
>Translated_315_residues MTRPFDLLRRLRAGVASVLLLSATGSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSIKVRHYIPDAVVS SYSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENDLAKFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLS TLDTLAWRYNVPEMAYPEALVPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLA DSRPGYWPAGALVEGDASTGKWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWALWRPYACCERKGQVFLGSVDFN >Mature_314_residues TRPFDLLRRLRAGVASVLLLSATGSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWTGCTVRTSIKVRHYIPDAVVSS YSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENDLAKFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLST LDTLAWRYNVPEMAYPEALVPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLAD SRPGYWPAGALVEGDASTGKWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWALWRPYACCERKGQVFLGSVDFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34503; Mature: 34372
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPFDLLRRLRAGVASVLLLSATGSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWT CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC GCTVRTSIKVRHYIPDAVVSSYSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENDLA CCEEEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEAL HHCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH VPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLA CCCHHHHCCCEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCEEEECHHHH DSRPGYWPAGALVEGDASTGKWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWALWRPYAC CCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEECCCHHH CERKGQVFLGSVDFN HCCCCCEEEEEECCC >Mature Secondary Structure TRPFDLLRRLRAGVASVLLLSATGSYALDTATVVGSVASPDCLEYRVVGICYWLYCTWT CCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC GCTVRTSIKVRHYIPDAVVSSYSNTGENPWVEVRAMSTPNPSAQAGGDGTTNEDHENDLA CCEEEEEEEEEECCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH KFKNADVIGHPGVEVFNQFVSSSGYFCEGAGTAFMPYLLSTLDTLAWRYNVPEMAYPEAL HHCCCCCCCCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH VPGMREVGARTTMNLWGNVYPRGGFLHQTDDHKAGAVVAQRAGDVVTRRGQIHVYQPLLA CCCHHHHCCCEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCCCEEEECHHHH DSRPGYWPAGALVEGDASTGKWQELTPVLSSSCTVFPRNDFLTQAQQGDYAWALWRPYAC CCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCEEEECCHHHHHCCCCCEEEEECCCHHH CERKGQVFLGSVDFN HCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA