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The map label for this gene is tniB

Identifier: 78047898

GI number: 78047898

Start: 2673250

End: 2674158

Strand: Reverse

Name: tniB

Synonym: XCV2342

Alternate gene names: NA

Gene position: 2674158-2673250 (Counterclockwise)

Preceding gene: 78047899

Following gene: 78047897

Centisome position: 51.64

GC content: 64.47

Gene sequence:

>909_bases
GTGGAAGAATATCCCATCATCGACTTGTCCCACCTGATGCCGGTGGCCCAGGGCTTGGCCCGTCTTCCGGCGGACGAACG
CATCCATCGCCTTCGCGCTGACCGCTGGATCGGCTATCCGCGAGCAGTCGAGGCGCTGAATCGGCTGGAAGCCCTGTATG
CGTGGCCGAACAAACAACGCATGCCCAACCTGCTGTTGGTCGGTCCAACCAACAACGGCAAGTCGATGATCGTCGAGAAA
TTCCGCCGCACCCACCCGGCCAGCTCCGACGCCGACCAGGAGCACATTCCGGTACTGGTCGTGCAGATGCCATCCGAACC
GTCGGTAATCCGCTTCTACGTCGCGCTACTTGCCGCGATGGGCGCGCCATTGCGCCCGCGCCCACGGCTGCCGGAAATGG
AGCAATTGGCGCTGGCACTGCTACGCAAGGTCGGCGTGCGCATGCTGGTGATCGACGAATTGCACAACGTCCTGGCCGGC
AACAGCGTCAACCGCCGGGAATTCCTCAACCTGCTGCGTTTCCTCGGCAACGAGCTGCGCATCCCGCTGGTCGGGGTCGG
CACACGCGATGCCTACTTGGCGATCCGCTCGGACGACCAGTTGGAAAACCGCTTCGAGCCGATGATGCTGCCGGTGTGGG
AGGCCAACGACGATTGCTGCTCACTGCTGGCCAGCTTCGCGGCTTCGCTCCCGCTGCGGCGACCCTCGTCGATTGCCACG
CTGGATATGGCCCGCTACCTGCTCACGCGCAGCGAGGGCACCATCGGCGAGCTGGCGCACCTGTTGATGGCGGCGGCCGT
CGCTGCCGTGGAGAGCGGTGAGGAAGCGATCAACCATCGCACGCTCAGCATGGCCGATTACACCGGTCCCAGCGAGCGGC
GGCGGCAATTCGAGCGGGAACTGATGTGA

Upstream 100 bases:

>100_bases
TTTTCAAAACCACGCCACCACCGGACGCGGACATGGCTGACCCGCAGGCAGACAACCAGCCACCTGCCAAACCGTTCGAC
CAGATTGAGGAGTGGTAGCC

Downstream 100 bases:

>100_bases
AGCCAGCGCCACACTGGCCACTGCATCCGGCTCCCAGGGAAGGCGAAGCCTTGTCTTCGTGGCTCAACCGCGTGGCCCTT
TGCTATCACATGGAGGTGTC

Product: transposition protein TniB

Products: NA

Alternate protein names: Transposition Helper Protein; Transposon Transposition Helper Protein C; TniB-Like Transposition Protein; Transposase; Tranposase Complex Protein; TniB Protein; Transposition Helper Protein Truncated; Urease Subunit Alpha

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEEYPIIDLSHLMPVAQGLARLPADERIHRLRADRWIGYPRAVEALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEK
FRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAG
NSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIAT
LDMARYLLTRSEGTIGELAHLLMAAAVAAVESGEEAINHRTLSMADYTGPSERRRQFERELM

Sequences:

>Translated_302_residues
MEEYPIIDLSHLMPVAQGLARLPADERIHRLRADRWIGYPRAVEALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEK
FRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAG
NSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIAT
LDMARYLLTRSEGTIGELAHLLMAAAVAAVESGEEAINHRTLSMADYTGPSERRRQFERELM
>Mature_302_residues
MEEYPIIDLSHLMPVAQGLARLPADERIHRLRADRWIGYPRAVEALNRLEALYAWPNKQRMPNLLLVGPTNNGKSMIVEK
FRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAMGAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAG
NSVNRREFLNLLRFLGNELRIPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIAT
LDMARYLLTRSEGTIGELAHLLMAAAVAAVESGEEAINHRTLSMADYTGPSERRRQFERELM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34045; Mature: 34045

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEYPIIDLSHLMPVAQGLARLPADERIHRLRADRWIGYPRAVEALNRLEALYAWPNKQR
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
MPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAM
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
GAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAGNSVNRREFLNLLRFLGNELR
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
IPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIAT
CEEEECCCCCEEEEECCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHH
LDMARYLLTRSEGTIGELAHLLMAAAVAAVESGEEAINHRTLSMADYTGPSERRRQFERE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHH
LM
CC
>Mature Secondary Structure
MEEYPIIDLSHLMPVAQGLARLPADERIHRLRADRWIGYPRAVEALNRLEALYAWPNKQR
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
MPNLLLVGPTNNGKSMIVEKFRRTHPASSDADQEHIPVLVVQMPSEPSVIRFYVALLAAM
CCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
GAPLRPRPRLPEMEQLALALLRKVGVRMLVIDELHNVLAGNSVNRREFLNLLRFLGNELR
CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCC
IPLVGVGTRDAYLAIRSDDQLENRFEPMMLPVWEANDDCCSLLASFAASLPLRRPSSIAT
CEEEECCCCCEEEEECCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCHHH
LDMARYLLTRSEGTIGELAHLLMAAAVAAVESGEEAINHRTLSMADYTGPSERRRQFERE
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCCHHHHHHHHHHH
LM
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA