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The map label for this gene is 78047820

Identifier: 78047820

GI number: 78047820

Start: 2596058

End: 2596966

Strand: Reverse

Name: 78047820

Synonym: XCV2264

Alternate gene names: NA

Gene position: 2596966-2596058 (Counterclockwise)

Preceding gene: 78047821

Following gene: 78047819

Centisome position: 50.15

GC content: 63.92

Gene sequence:

>909_bases
ATGTCCCTCGATCTTGAATCTACTGCTGCACAAGCCACGCCCGTGCAGAGCGAACTGCTCGACGCGGAATCTTCCCCTTT
GACCCTGAGCCTTCAGGATTTCGTTGGTGAGTTCGGCGACGAACTGCTCGACTCCCTCAATCGCGCCAACCCGCCGGTCT
ATACGGGTCAGCCGCAAACGCGCCGTCAGCTTATCGTCGCCAGCCTCAAGCGCAAACTGTTTGAGGCCCAGGCGGAAGTC
GTCCATGCCGCCGCCGAGTTGCTGATCGACCGTGGCGAACGCGCCGCGATCGTCAACGGCGAGATGGGTTGCGGCAAGAC
GACCGTCGGCATCGCCACGGCCGCCGTACTCAACGCCGAGGGCTACCGCCGCACCCTGGTTCTTTCGCCACCGCATCTGG
TTTACAAGTGGCGGCGCGAGATTCAGGAGACAGTGGCCGGCGCCAAGGTCTGGGTACTCAACGGCCCCGACACGCTGGTC
AAACTCATCAAACTGCGCGAGCAGTTGGGTGTGCAGCCCACGGGCCAGGAGTTCTTCGTCCTTGGGCGTGTGCGGATGCG
GATGGGCTTCCACTGGCGGCCCGTCTTCACCCGGCGGCGCACCCGCCACGGCGACGTGGCAGCCTGCCCGGACTGCGGCC
ATATCATCACAGACCTCGACGGCGAGCCGGTCAATCCGATCGAACTCGACGCCGAGGAGTACCGCAGGAAGTGCAGCCAT
TGCGCCGGGTTCACCCCCGTTTTCACGGACACTTACAAGAAGGCCGATCAAGGCCATGAGGAGTGTTCATGTCAAAGCGC
AGGAAGTTCACTGCCGAGTTCAAGCGTGGCGCGGTTGAGCAGGCCAGCCAGCCCGGCGTCAGCTGTGCCCAGGTGGCCCG
GGAGCTGGGGATTCGCGACACCCTGCTGA

Upstream 100 bases:

>100_bases
ACAGTCGGCCGTGTGCCGATTGAGATTGATCTTCCCACCCGGGGCATGCCATTGCCCCGCTGGGGGTGGTGCATGCCCCA
TTTTTCTGTGGAGCATCACC

Downstream 100 bases:

>100_bases
CCCGCTGGAAGCGCGAGGCGCAGACCCCGGGGACGGCCGCATTCGGCGGCAGTGGCACGCCTCGGGACGAGGAGCTGGCT
CGACTCAAGCGCGAGTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase Domain-Containing Protein; Plasmid-Related Protein; Helicase Conserved C-Terminal Domain Protein; Dead/Deah Box Helicase; DEAD/DEAH Box Helicase; Helicase Domain Protein

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQTRRQLIVASLKRKLFEAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWRPVFTRRRTRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSH
CAGFTPVFTDTYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFATPC

Sequences:

>Translated_302_residues
MSLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQTRRQLIVASLKRKLFEAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVQPTGQEFFVLGRVRMRMGFHWRPVFTRRRTRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSH
CAGFTPVFTDTYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFATPC
>Mature_301_residues
SLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQTRRQLIVASLKRKLFEAQAEVV
HAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVK
LIKLREQLGVQPTGQEFFVLGRVRMRMGFHWRPVFTRRRTRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSHC
AGFTPVFTDTYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFATPC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33066; Mature: 32935

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQT
CCCCCCHHHHHCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCHH
RRQLIVASLKRKLFEAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCC
GYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKLIKLREQLGVQPTGQEFFV
CCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEE
LGRVRMRMGFHWRPVFTRRRTRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSH
HHHHHHHHCCCCCHHHHHHCCCCCCCEECCCCCCHHCCCCCCCCCCEECCHHHHHHHHHH
CAGFTPVFTDTYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFAT
HCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PC
CC
>Mature Secondary Structure 
SLDLESTAAQATPVQSELLDAESSPLTLSLQDFVGEFGDELLDSLNRANPPVYTGQPQT
CCCCCHHHHHCCCHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCHH
RRQLIVASLKRKLFEAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCC
GYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKLIKLREQLGVQPTGQEFFV
CCEEEEEECCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCHHEE
LGRVRMRMGFHWRPVFTRRRTRHGDVAACPDCGHIITDLDGEPVNPIELDAEEYRRKCSH
HHHHHHHHCCCCCHHHHHHCCCCCCCEECCCCCCHHCCCCCCCCCCEECCHHHHHHHHHH
CAGFTPVFTDTYKKADQGHEECSCQSAGSSLPSSSVARLSRPASPASAVPRWPGSWGFAT
HCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
PC
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA