Click here to switch to the map view.

The map label for this gene is yhfW [H]

Identifier: 78047768

GI number: 78047768

Start: 2540729

End: 2541940

Strand: Reverse

Name: yhfW [H]

Synonym: XCV2212

Alternate gene names: 78047768

Gene position: 2541940-2540729 (Counterclockwise)

Preceding gene: 78047771

Following gene: 78047762

Centisome position: 49.09

GC content: 64.52

Gene sequence:

>1212_bases
ATGGACCTCAAAAGTGGCTACCCGTTCTGGTCGATCCGCAACGGGTTGATGCGCGCGTACCCGCGCCTGGAGCAAGACAC
CGTCTGCGAAGTGGCCATCGTCGGTGGTGGGGTGACCGCCGCGCTGATTGCCCACGAATTGGTGCGCCATGGGCACGAAG
TCGCGGTAGTCGAACAGCGCGACATCGGCTGGGGCAGCACCTCGGCCAGCACCGCATTGCTCCAGTACGAAATCGATACA
CCGATGATCGAACTGGCCAGACAGCACGGCATGCAGGCAGCGGCACTGGCCTATGGGGCGTGCGCGCAAGCCATCCTCGA
CCTGCAGGGCCTGTGCAATACCTTCGGCGGCACCGACTTCACGCGCCAGGACAGCCTGTACTACGCCAGCCGCTCGCGCG
ATATAAAAGACCTGCGCAGCGAGCTGGAGACCCGCCAGGCGCAGAGACTGCCGGTGGAGTGGATCGAACGCGAGCCGCTC
TGGCACAACTACGGCGTGCATTCGGATGGCGCGATTCTGAGCCGCCTGGCCGCCAGCGTAGACCCGTACCGCCTGTGCTA
CCGCCTGTTTTCCGAGTGCGAGCAATACGGCGCACGCATCTATGACCGCACCGCCATTGCCTCGATCGATCCGCACGACC
CGCATGTCGACCTGCGCACCGAAGACGGTGTGAGCGTGCGTGCCCGGCACGTGATCCTGGCAGCCGGCTATGGCAACCAG
CGCTGGCTCTCGCAGCCGGTGGCGCGCAATCGCAGCAGCTACGCCTTCGTGACCGACCCCCTGCACGACAGCGAAATGGG
CGCGCTCAAGCACACCATGATGTGGGAGACCGCGCGCCCGTACCTGTACCTGCGCAGCACACCAGACGGGCGCGTGGTCG
CTGGTGGCGAAGACGACAACATCGACATTCCCCCTCGCCGCGACGCACGCGTGCGGGGCAAGCTCAGGACGTTGCTGAAG
AAAATTGGCAAGACCATGCCCGATATGCGCCTGCGCCCGGCGTTCGCATGGGCTGGCACCTTCGCAGAAACTGCCGATGG
ATTGCCGTTCTTCGGGCCGCATGCCGAACTGGGGCCACGTGTATCGTTCGCGATGGCCTATGGCGGCAACGGCATTACCT
ATAGCGCCATTGGCGCAGGCTTGTTGCGTGCACAACTAGAGGGCACGCCTCACCCGCTGTCCGAATTGTTCGGCTTCGCG
CGCTTGGGTTGA

Upstream 100 bases:

>100_bases
TTTGCCGTTTGGTGACGGCGGCAAGGCCGGGCTCGCCTCACGGCCGCTTCACCCCGCTTGGCGGTCAATCGCCGTCCATC
CGCTCGCTGCTCGACACCGC

Downstream 100 bases:

>100_bases
ATCCCCCACGGCCACCAACCGTGGCCGTGCATCGCATAGGTATCGGCAGCCCGCTCCAGCGGATTGCGCACGTGGATGCC
GCCGCACAGAACATACATGG

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTVCEVAIVGGGVTAALIAHELVRHGHEVAVVEQRDIGWGSTSASTALLQYEIDT
PMIELARQHGMQAAALAYGACAQAILDLQGLCNTFGGTDFTRQDSLYYASRSRDIKDLRSELETRQAQRLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIYDRTAIASIDPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSEMGALKHTMMWETARPYLYLRSTPDGRVVAGGEDDNIDIPPRRDARVRGKLRTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHPLSELFGFA
RLG

Sequences:

>Translated_403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTVCEVAIVGGGVTAALIAHELVRHGHEVAVVEQRDIGWGSTSASTALLQYEIDT
PMIELARQHGMQAAALAYGACAQAILDLQGLCNTFGGTDFTRQDSLYYASRSRDIKDLRSELETRQAQRLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIYDRTAIASIDPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSEMGALKHTMMWETARPYLYLRSTPDGRVVAGGEDDNIDIPPRRDARVRGKLRTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHPLSELFGFA
RLG
>Mature_403_residues
MDLKSGYPFWSIRNGLMRAYPRLEQDTVCEVAIVGGGVTAALIAHELVRHGHEVAVVEQRDIGWGSTSASTALLQYEIDT
PMIELARQHGMQAAALAYGACAQAILDLQGLCNTFGGTDFTRQDSLYYASRSRDIKDLRSELETRQAQRLPVEWIEREPL
WHNYGVHSDGAILSRLAASVDPYRLCYRLFSECEQYGARIYDRTAIASIDPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
RWLSQPVARNRSSYAFVTDPLHDSEMGALKHTMMWETARPYLYLRSTPDGRVVAGGEDDNIDIPPRRDARVRGKLRTLLK
KIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPRVSFAMAYGGNGITYSAIGAGLLRAQLEGTPHPLSELFGFA
RLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=393, Percent_Identity=23.6641221374046, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 44692; Mature: 44692

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLKSGYPFWSIRNGLMRAYPRLEQDTVCEVAIVGGGVTAALIAHELVRHGHEVAVVEQR
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
DIGWGSTSASTALLQYEIDTPMIELARQHGMQAAALAYGACAQAILDLQGLCNTFGGTDF
CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TRQDSLYYASRSRDIKDLRSELETRQAQRLPVEWIEREPLWHNYGVHSDGAILSRLAASV
CCCCCEEEHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
DPYRLCYRLFSECEQYGARIYDRTAIASIDPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCH
RWLSQPVARNRSSYAFVTDPLHDSEMGALKHTMMWETARPYLYLRSTPDGRVVAGGEDDN
HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
IDIPPRRDARVRGKLRTLLKKIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCC
VSFAMAYGGNGITYSAIGAGLLRAQLEGTPHPLSELFGFARLG
EEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDLKSGYPFWSIRNGLMRAYPRLEQDTVCEVAIVGGGVTAALIAHELVRHGHEVAVVEQR
CCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEEEC
DIGWGSTSASTALLQYEIDTPMIELARQHGMQAAALAYGACAQAILDLQGLCNTFGGTDF
CCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TRQDSLYYASRSRDIKDLRSELETRQAQRLPVEWIEREPLWHNYGVHSDGAILSRLAASV
CCCCCEEEHHCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHCC
DPYRLCYRLFSECEQYGARIYDRTAIASIDPHDPHVDLRTEDGVSVRARHVILAAGYGNQ
CHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCH
RWLSQPVARNRSSYAFVTDPLHDSEMGALKHTMMWETARPYLYLRSTPDGRVVAGGEDDN
HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCCCC
IDIPPRRDARVRGKLRTLLKKIGKTMPDMRLRPAFAWAGTFAETADGLPFFGPHAELGPR
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHCCCCCCCCCCCCCCCC
VSFAMAYGGNGITYSAIGAGLLRAQLEGTPHPLSELFGFARLG
EEEEEEECCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]