| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is nreB [H]
Identifier: 78047596
GI number: 78047596
Start: 2321826
End: 2323958
Strand: Reverse
Name: nreB [H]
Synonym: XCV2040
Alternate gene names: 78047596
Gene position: 2323958-2321826 (Counterclockwise)
Preceding gene: 78047598
Following gene: 78047595
Centisome position: 44.88
GC content: 66.39
Gene sequence:
>2133_bases ATGGCCGCATCGCCAGCACTCAAGGTCGTCCGCGGATCCATGCAACAGCCCGTCGCCGCGCCCGCATTTTCGTCTGCCCC CGTCTCCTGCCTCCGTCTGGCCGAGCGCCTGCAGCAAGGCTTGTGGACACTGACCGGCCTGTACCTGCTGGTTGGCGTGA TCTGGCTGCTGCTGGGCAACCGGCTGCTCAACCTGGCCGGCGCCGCCATGCCGGAGCGCTGGTCGGATGCGAGCTTTCTG GTGCTGTCCAGCATCGTCATCCACCTGGTGCTGCGCCGCTTTACCGGCTTGATCGTGGACGAGTACGCCCAGCTGGCGCA GTCCGAGGCGTTGCTGCAAGCCAAGTTCCTGGCATTGCCCAGCCCGGCCTTCATTTACGACCTGGCCACCATGCGCATCC TCGACGCCAATCCGGCGGCGCTGGAATTCTTCGGCTGGGAGCGCGACGAGTTCCTGCAGCAGACGCTGCAGGCGATCTGG CCCAATGCCGATGGCGAGCGGCTGGAAGAGATCATTGCGCAGATCCGTGGCAAGGGGGATGCCACCTGCGTGTTGAACGA GGACCTGATGACGCGCAGCGGCCCGCGGCATGTCGAGGTGCGCAGCAACCAGCTGCATCTGGCCAGCGGTCCTGCCCGCC TGGTCGTCACCGTAGACCGCAGCGAAGAGCGCCGGGCGCAGGATCTGCGCGACGAGGCGCTCGAACGCCTGGAAGAGGCG CAGAGCATCGCGCGGCTGGGCTCCTGGCAACTGGATCGCACCACTGGCCTGGGGCGCTATTCGCCAGCGGTCTACCGCCT GCTGGGGCGCAGCGTGCCGATGCACCGTCGTGAGCATCGGCTGGAAGAATTGCTGACCGCCTCCGACAGCGCGACCCAGG TGCGCATCGAACGCATGATCGAAGACATGTGTACCGGTGGCGAGGTGCAGATCGATGTGCTGCTGCCGCTGACCGGTGGC GATTCGCAACCGCGCACGGTGCATCTGCGCGCCGAAAGCGTGACCAGCCCCAGCGGCGTGCGCCATGTGCACGGCACCTT GCAGGACGTGAGCGAACGCGAGCAATCGCGCCGGCTGCTGCGCGAACGCGAGGAGCAGTTTCGCGAGTTGGTGCGCGTGC TGCCCGACGGTGTGCTGATTCTCGCCGACGAGCATGTGATGTATGCCAACGCGGCCGGCTCGGCCCAGTTCGGCTTCCAG GGCGAAACCATCCTGGGCGAACCACTGCAGACCCTGGTGGGCGACAACGACCTGCCGGTGGTGCGCGAATACCTGCGCGC AGGCAGCGATCGCAATGAGCCGGTGTCCAGCGCACGCGCGATGCGTCGTCGCGACGGCAGCACCTTCTACGCAGGTCTGT CGGCCGGCGACATCCGCTACGGCGGACGCAGCTGCAAGTTGCTGGTGGTGCGCGATCTGAGCGAACCCGAGCGCATGCGC GATGCCCTGGCCGAGAGCAATGCCGAACTGCAGGCGATGGCCAAACGTCTGTTTTCGTTGCAGGAAGATGAGCGGCGTGC CATCTCGCGCGACCTGCATGACGACATCGGGCAAGCGATCACTGCGATGAAGTTGTCTGCGCACGCAGCCCTGGATGAGC CGGACGCGGACGCGCGCCGCGAGGACTTGCTGGAAGTCGTGTCGCTGGCCGACACCACGGTGACCAAGCTGCGCAATCTG TCGATGCTGTTGCGCCCGCCACAACTCGATGCCCTGGGCCTGGAGGCAGCGCTGCGTTGGCAGGCATCGATGCTGTTCCG CGCCTCGCAGGTTCGGCTGGAGCTCGATATTCAGGCACTCGAGGAACGGCCGGGCAACGAGATCGAACAGGCCTGCTTCC GGATCGCGCAGGAAAGCCTGACCAATGCGTTGCGGCACGCCTGCGCCGGCGAAGTGCACCTGCGTCTGCATTCGATCGAT GGCGACAGTTTCCGCCTGGAAGTCAGCGACGACGGCGATGGGTTCGAGCCGGAGGGTCCGCGTGGGCTGGGGCTGATCGT GATGCGTGAGCGTGCGCAAACCGTCGGCGGCACGCTCGCGATAGAATCAGCCCCCGGAGCAGGCACGCGCGTGACGTTGC GCCTGCCCTATCACCCGGTCGGCGAGTCCGTCCACGACGATGGTGGACGTTGA
Upstream 100 bases:
>100_bases TCGACCCCGGCCTCGGAGTCGCAATGGATAACGGCCGTGCCGGCCAATAGTTGAGCCACCTGTTGCGAGCTGGACCGAAC CGGCCCGAGTTACGGCTAAG
Downstream 100 bases:
>100_bases GTCATGTGGAGTCCCGTAATCCCGCCCGGACTGGAAATCGTCAAGCCCACCCGGCTTGGCGCGGGCAACCCCGAATTGCT GCACCTGGTGGATGCGGCCG
Product: sensory box histidine kinase
Products: NA
Alternate protein names: Nitrogen regulation protein B [H]
Number of amino acids: Translated: 710; Mature: 709
Protein sequence:
>710_residues MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLQQGLWTLTGLYLLVGVIWLLLGNRLLNLAGAAMPERWSDASFL VLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFLALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIW PNADGERLEEIIAQIRGKGDATCVLNEDLMTRSGPRHVEVRSNQLHLASGPARLVVTVDRSEERRAQDLRDEALERLEEA QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQVRIERMIEDMCTGGEVQIDVLLPLTGG DSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQ GETILGEPLQTLVGDNDLPVVREYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLSEPERMR DALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNL SMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSID GDSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR
Sequences:
>Translated_710_residues MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLQQGLWTLTGLYLLVGVIWLLLGNRLLNLAGAAMPERWSDASFL VLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFLALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIW PNADGERLEEIIAQIRGKGDATCVLNEDLMTRSGPRHVEVRSNQLHLASGPARLVVTVDRSEERRAQDLRDEALERLEEA QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQVRIERMIEDMCTGGEVQIDVLLPLTGG DSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQ GETILGEPLQTLVGDNDLPVVREYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLSEPERMR DALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNL SMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSID GDSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR >Mature_709_residues AASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLQQGLWTLTGLYLLVGVIWLLLGNRLLNLAGAAMPERWSDASFLV LSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFLALPSPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWP NADGERLEEIIAQIRGKGDATCVLNEDLMTRSGPRHVEVRSNQLHLASGPARLVVTVDRSEERRAQDLRDEALERLEEAQ SIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQVRIERMIEDMCTGGEVQIDVLLPLTGGD SQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLLREREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQG ETILGEPLQTLVGDNDLPVVREYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLSEPERMRD ALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARREDLLEVVSLADTTVTKLRNLS MLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQALEERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDG DSFRLEVSDDGDGFEPEGPRGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR
Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. NreB functions as a direct oxygen sensor histidine kinase which is autophosphorylated, in the absence of oxyg
COG id: COG4585
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI87082311, Length=236, Percent_Identity=36.4406779661017, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1787474, Length=257, Percent_Identity=28.0155642023346, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1788812, Length=195, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR011712 - InterPro: IPR005467 - InterPro: IPR017203 [H]
Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 78559; Mature: 78428
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS50112 PAS ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLQQGLWTLTGLYLLVGVIWLLLGN CCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLNLAGAAMPERWSDASFLVLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFLALP HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWPNADGERLEEIIAQIRGKGD CCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC ATCVLNEDLMTRSGPRHVEVRSNQLHLASGPARLVVTVDRSEERRAQDLRDEALERLEEA EEEEECCHHHHCCCCCEEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQVRIERMI HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH EDMCTGGEVQIDVLLPLTGGDSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLL HHHCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH REREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQGETILGEPLQTLVGDNDLPV HHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH VREYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLSEPERMR HHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHHH DALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARR HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EDLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHHH EERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSFRLEVSDDGDGFEPEGP HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC RGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR CCCEEEEEEHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure AASPALKVVRGSMQQPVAAPAFSSAPVSCLRLAERLQQGLWTLTGLYLLVGVIWLLLGN CCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLNLAGAAMPERWSDASFLVLSSIVIHLVLRRFTGLIVDEYAQLAQSEALLQAKFLALP HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPAFIYDLATMRILDANPAALEFFGWERDEFLQQTLQAIWPNADGERLEEIIAQIRGKGD CCHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC ATCVLNEDLMTRSGPRHVEVRSNQLHLASGPARLVVTVDRSEERRAQDLRDEALERLEEA EEEEECCHHHHCCCCCEEEEECCEEEEECCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH QSIARLGSWQLDRTTGLGRYSPAVYRLLGRSVPMHRREHRLEELLTASDSATQVRIERMI HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHH EDMCTGGEVQIDVLLPLTGGDSQPRTVHLRAESVTSPSGVRHVHGTLQDVSEREQSRRLL HHHCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH REREEQFRELVRVLPDGVLILADEHVMYANAAGSAQFGFQGETILGEPLQTLVGDNDLPV HHHHHHHHHHHHHCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCHH VREYLRAGSDRNEPVSSARAMRRRDGSTFYAGLSAGDIRYGGRSCKLLVVRDLSEPERMR HHHHHHCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCEEECCCCEEEEEEECCCCHHHHH DALAESNAELQAMAKRLFSLQEDERRAISRDLHDDIGQAITAMKLSAHAALDEPDADARR HHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH EDLLEVVSLADTTVTKLRNLSMLLRPPQLDALGLEAALRWQASMLFRASQVRLELDIQAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEHHHH EERPGNEIEQACFRIAQESLTNALRHACAGEVHLRLHSIDGDSFRLEVSDDGDGFEPEGP HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCC RGLGLIVMRERAQTVGGTLAIESAPGAGTRVTLRLPYHPVGESVHDDGGR CCCEEEEEEHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA