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The map label for this gene is fliM [H]

Identifier: 78047547

GI number: 78047547

Start: 2271161

End: 2272174

Strand: Reverse

Name: fliM [H]

Synonym: XCV1991

Alternate gene names: 78047547

Gene position: 2272174-2271161 (Counterclockwise)

Preceding gene: 78047548

Following gene: 78047546

Centisome position: 43.88

GC content: 64.0

Gene sequence:

>1014_bases
ATGAGCGTCAGTGATCTGCTTTCCCAAGACGAGATCGATGCCCTGCTGCATGGCGTGGATTCGGGCGCGGTCAACATCGA
GCCGGAGCCGCTGCCCGGCGAGGCGCGCCAATACGATCTGTCCAGCCAGGACCGCATCATCCGTGGGCGCATGCCGACCC
TGGAGATGGTCAACGAGCGCTTCGCGCGGTTGTGGCGGATCGGCCTGTTCAACCTGATCCGGCGCTCGGCCGACCTGTCG
GTGCGCGGCATCGACCTGGTCAAGTTCAACGAGTACATGCACTCGCTGTACGTGCCGACCAACCTCAACCTGATCCGGTT
CAAGCCGCTGCGTGGTACCGGGCTGATCGTGTTCGAACCCACCCTGGTGTTCACCGTGGTGGACAACTTCTTCGGTGGCG
ACGGCCGCTTCCACACCCGCATCGAAGGCCGCGAATTCACCGCCACCGAGATGCGTGTGATCCAGCTGATGCTCAAGCAG
ACCTTCGCCGACCTGAAGGAAGCCTGGGCACCGGTGATGGACGTGGACTTCGAGTACATCAACTCCGAGATCAACCCGCA
CTTCGCCAACATCGTCACCCCGCGCGAGTACGTGGTGGTGTGCCGGTTCCATGTGGAGCTGGAAGGCGGCGGCGGCGAGA
TCCACATCACCCTGCCGTATTCGATGCTGGAGCCGATCCGCGAACTGCTCGATGCCGGCATCCAGAGCGACCGCAACGAC
CGCGACGACTCGTGGAACGTGATGCTGCGCGAGCAGCTGGACACCGCCGAGGTCACGCTCTCCAGCGTGCTGGCCAGCAA
GCGCATGAGCCTGCGCCAGCTCACCGGGTTGAAGGTCGGCGACATCCTGCCGATCGACCTGCCCGCCCAGGTGCCGCTGT
GCGTGGAAGACATCCCGTTATTCACCGGCGAATTCGGCGTTTCCAATGGCAACAACGCCGTCAAGATCACCGCCGTACGC
CCGCCCGGCGTGCAAGCCCCACGCGCCGTTCCCTCCCAGGACCCCAGCAAATGA

Upstream 100 bases:

>100_bases
GCCCTGGCCGAAGCGCAGAAGGTCATGACCAGCGAGACCGGCAAGAAGTGCGTCGAAGAATTGCTGTTCACCAGTTTCGT
GACCCAGTAAGGCCTGTCCG

Downstream 100 bases:

>100_bases
TCAACTCCGACATCCTCGACGCCTCGCCTGCCACCTTCGACAGCCTGCAGGCCGAGCAGGACCAGAACGCCGCCGACCTC
AACCTGGACGTGATCCTGGA

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MSVSDLLSQDEIDALLHGVDSGAVNIEPEPLPGEARQYDLSSQDRIIRGRMPTLEMVNERFARLWRIGLFNLIRRSADLS
VRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRFHTRIEGREFTATEMRVIQLMLKQ
TFADLKEAWAPVMDVDFEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEDIPLFTGEFGVSNGNNAVKITAVR
PPGVQAPRAVPSQDPSK

Sequences:

>Translated_337_residues
MSVSDLLSQDEIDALLHGVDSGAVNIEPEPLPGEARQYDLSSQDRIIRGRMPTLEMVNERFARLWRIGLFNLIRRSADLS
VRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRFHTRIEGREFTATEMRVIQLMLKQ
TFADLKEAWAPVMDVDFEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEDIPLFTGEFGVSNGNNAVKITAVR
PPGVQAPRAVPSQDPSK
>Mature_336_residues
SVSDLLSQDEIDALLHGVDSGAVNIEPEPLPGEARQYDLSSQDRIIRGRMPTLEMVNERFARLWRIGLFNLIRRSADLSV
RGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEPTLVFTVVDNFFGGDGRFHTRIEGREFTATEMRVIQLMLKQT
FADLKEAWAPVMDVDFEYINSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRNDR
DDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEDIPLFTGEFGVSNGNNAVKITAVRP
PGVQAPRAVPSQDPSK

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

Organism=Escherichia coli, GI1788255, Length=315, Percent_Identity=46.031746031746, Blast_Score=269, Evalue=2e-73,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37846; Mature: 37715

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSDLLSQDEIDALLHGVDSGAVNIEPEPLPGEARQYDLSSQDRIIRGRMPTLEMVNER
CCHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
FARLWRIGLFNLIRRSADLSVRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEP
HHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHEECCCCCCEEEEECCCCCEEEEECC
TLVFTVVDNFFGGDGRFHTRIEGREFTATEMRVIQLMLKQTFADLKEAWAPVMDVDFEYI
CEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH
NSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
CCCCCCCHHEECCCCEEEEEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEDIPL
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEHHCCCE
FTGEFGVSNGNNAVKITAVRPPGVQAPRAVPSQDPSK
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SVSDLLSQDEIDALLHGVDSGAVNIEPEPLPGEARQYDLSSQDRIIRGRMPTLEMVNER
CHHHHHCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHH
FARLWRIGLFNLIRRSADLSVRGIDLVKFNEYMHSLYVPTNLNLIRFKPLRGTGLIVFEP
HHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHEECCCCCCEEEEECCCCCEEEEECC
TLVFTVVDNFFGGDGRFHTRIEGREFTATEMRVIQLMLKQTFADLKEAWAPVMDVDFEYI
CEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH
NSEINPHFANIVTPREYVVVCRFHVELEGGGGEIHITLPYSMLEPIRELLDAGIQSDRND
CCCCCCCHHEECCCCEEEEEEEEEEEEECCCCEEEEEECHHHHHHHHHHHHCCCCCCCCC
RDDSWNVMLREQLDTAEVTLSSVLASKRMSLRQLTGLKVGDILPIDLPAQVPLCVEDIPL
CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCEEHHCCCE
FTGEFGVSNGNNAVKITAVRPPGVQAPRAVPSQDPSK
EECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]