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The map label for this gene is flhF [H]

Identifier: 78047535

GI number: 78047535

Start: 2253068

End: 2254768

Strand: Reverse

Name: flhF [H]

Synonym: XCV1979

Alternate gene names: 78047535

Gene position: 2254768-2253068 (Counterclockwise)

Preceding gene: 78047536

Following gene: 78047534

Centisome position: 43.54

GC content: 70.78

Gene sequence:

>1701_bases
ATGAAGATCAAACGCTTTGTCGCCCCGGACATGCGCACCGCATTCCGCATGGTGCGTGAAGAACACGGCCCGGACGCGGT
GATCCTGTCCAACCGTCGCACCGCCGAAGGCATCGAGATCGTCGCTGCCAGCAATTACGACGAAGAGCTCGTGCAGCGCG
CCCTGGAAACCGCGCGCTCCGACACCCCGGCCCCCGCACAGCACCAGCAGGCTCCCGCTCAGCCGGCGCCTGCCCCGCAA
GCCCCGGCCAGGCCCGCTGCACCGGTGCACGCCCTGCTCAAGCCGTCTGCCGACGCCGAGGCAAGCCAGCGCCAGCGCGT
CGCCAGCGCCGCCGACGACATGATTGCCGCCATGGCGCTGCGCCAGCCGGTCAGCGTGCCGCGCCAGGCGCCGGTCGCCG
CGCCGGTGCGTACCGCCAGCATCCCTTCGCCCGCTGCCCAGGCACTCGCCCACGCGGTTGCCGTCACCGCCGCGCCGCGC
CAGGAACACGCGCTGTCGGCCGTACCGGAACAGTTGTTCGCCGACTTTTTGACCACTGCACCGGTGCAGCGCCCGGCCGT
CCCGGCCACGGCGGTGCAGGCGCCCGCGCCGGTCGCGGCGGCAACGGTCACCGCCCCGGCGTTTGCTGCCGCAGGCCAGG
ACGACGACGCCTTCGCCGATGAAGCCGACTTCGATCTGGACGACGCACTTCCGCAGATCCTGCCGCCGGCCGCGCTGCCG
CCGATCGTGGTCGCCCCGCCCGCCCCCGCTGCGCTGGCCGCAGTGCCGGTGGCGGCCGCGCCGATCCCGCAGAACGACGA
AGAACTCAAGCAACTGCGTGGCGAGCTGGCGCTGATGCGGCAGATGATCGAGCGCGAAATGAACCGCCTCACCGACGAGC
GCCTGCGTGGCTCGCCGGTGCGCGCCCAGGCGCTGGAACTGATGGACGACTACGGCTTCGACGCCGGCCTGACCCGCGAT
ATCGCCCTGCAGATCCCGGCCGATACCGAATTGCACCGTGGCCGCGGCCTGATGCTGGGCTTGCTGTCCAAGCGGTTGCC
GGTGTCCCCGGTCGACCCGCTGGAACGTGGCGGCGTCATCGCCCTGGTCGGCCCGACCGGCGCCGGCAAGACCACCACCA
TCGCCAAGCTCGCCCAGCGCTTTGCCGCCCAGCACGCCCCGCGCGACGTGGCCCTGGTCACCACCGACACCCAGCGCGTG
GGCGGCCGCGAACAGCTGCACAGCTACGGCCGCCAGCTCGGCATCGCGGTGCACGAGGCCGACAGCGCCGAAAGCCTGCT
GGACCTGCTCGAGCGCCTGCGCGACTACAAGCTGGTGCTGATCGACACCGCCGGCATGGGCCAGCGCGACCGCGCCCTGG
CCGCCCAGCTGAACTGGCTGCGTGCCGCCCAGCAGGTCACCTCGCTGCTGGTACTGCCTGCCAACGCCCATTTTTCCGAC
CTCGACGAGGTCGTACGCCGCTTCGCCCACGCCAAGCCCCAAGGCGTGGTGCTGACCAAACTCGACGAGACCGGCCGCTT
CGGCAGCGCCTTGTCGGTGGTGGTCGACCACCAAATGCCCATCACCTGGGTGACTGACGGACAGCGGGTCCCTGACGACC
TGCACCGCGCCAATGCCGCCAGTCTCGTTCTTCGCCTTGAAGATTTGCGGCGCGCTGCCGATAAGCCCTGTACTCCGGAG
CACAACCATGCAGTCGCGTGA

Upstream 100 bases:

>100_bases
CGAACGAACGGGACAGGCAACTCATGACGCTGGCAACACACCCACATTCATCGCACACCCGTCCGGCGTCCGGCGGGTCC
CGTTCCTGGAGGCACTTCGT

Downstream 100 bases:

>100_bases
ATACGCCAAGCTGACCAACGCCTTCCCCCTGTCGGCGACCCGTCCCGAGCCTTTGGGCCCGGTGCGCACCATTGCCGTGA
CCGGTGGCAAGGGCGGCGTG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 566

Protein sequence:

>566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPAPAQHQQAPAQPAPAPQ
APARPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAAATVTAPAFAAAGQDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPAALAAVPVAAAPIPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVSPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA

Sequences:

>Translated_566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPAPAQHQQAPAQPAPAPQ
APARPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAAATVTAPAFAAAGQDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPAALAAVPVAAAPIPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVSPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA
>Mature_566_residues
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARSDTPAPAQHQQAPAQPAPAPQ
APARPAAPVHALLKPSADAEASQRQRVASAADDMIAAMALRQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPR
QEHALSAVPEQLFADFLTTAPVQRPAVPATAVQAPAPVAAATVTAPAFAAAGQDDDAFADEADFDLDDALPQILPPAALP
PIVVAPPAPAALAAVPVAAAPIPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPVRAQALELMDDYGFDAGLTRD
IALQIPADTELHRGRGLMLGLLSKRLPVSPVDPLERGGVIALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRV
GGREQLHSYGRQLGIAVHEADSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAASLVLRLEDLRRAADKPCTPE
HNHAVA

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=215, Percent_Identity=31.1627906976744, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788963, Length=201, Percent_Identity=29.3532338308458, Blast_Score=72, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 60334; Mature: 60334

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARS
CCCCHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
DTPAPAQHQQAPAQPAPAPQAPARPAAPVHALLKPSADAEASQRQRVASAADDMIAAMAL
CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPRQEHALSAVPEQLFADFLTTA
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PVQRPAVPATAVQAPAPVAAATVTAPAFAAAGQDDDAFADEADFDLDDALPQILPPAALP
CCCCCCCCHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PIVVAPPAPAALAAVPVAAAPIPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPV
CEEECCCCCHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAQALELMDDYGFDAGLTRDIALQIPADTELHRGRGLMLGLLSKRLPVSPVDPLERGGVI
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCHHHCCCEE
ALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEA
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHCEEEECC
DSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
CCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHH
SLVLRLEDLRRAADKPCTPEHNHAVA
HHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKIKRFVAPDMRTAFRMVREEHGPDAVILSNRRTAEGIEIVAASNYDEELVQRALETARS
CCCCHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
DTPAPAQHQQAPAQPAPAPQAPARPAAPVHALLKPSADAEASQRQRVASAADDMIAAMAL
CCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
RQPVSVPRQAPVAAPVRTASIPSPAAQALAHAVAVTAAPRQEHALSAVPEQLFADFLTTA
HCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
PVQRPAVPATAVQAPAPVAAATVTAPAFAAAGQDDDAFADEADFDLDDALPQILPPAALP
CCCCCCCCHHHCCCCCCHHHHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
PIVVAPPAPAALAAVPVAAAPIPQNDEELKQLRGELALMRQMIEREMNRLTDERLRGSPV
CEEECCCCCHHHHHHCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
RAQALELMDDYGFDAGLTRDIALQIPADTELHRGRGLMLGLLSKRLPVSPVDPLERGGVI
HHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHHCCCCCCCCCHHHCCCEE
ALVGPTGAGKTTTIAKLAQRFAAQHAPRDVALVTTDTQRVGGREQLHSYGRQLGIAVHEA
EEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHCCCHHHHHHHHHHHCEEEECC
DSAESLLDLLERLRDYKLVLIDTAGMGQRDRALAAQLNWLRAAQQVTSLLVLPANAHFSD
CCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHHH
LDEVVRRFAHAKPQGVVLTKLDETGRFGSALSVVVDHQMPITWVTDGQRVPDDLHRANAA
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCHHHHHHHHH
SLVLRLEDLRRAADKPCTPEHNHAVA
HHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9503621 [H]