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The map label for this gene is tse [H]

Identifier: 78047504

GI number: 78047504

Start: 2215007

End: 2216644

Strand: Reverse

Name: tse [H]

Synonym: XCV1948

Alternate gene names: 78047504

Gene position: 2216644-2215007 (Counterclockwise)

Preceding gene: 78047505

Following gene: 78047503

Centisome position: 42.81

GC content: 65.87

Gene sequence:

>1638_bases
ATGGCCGCATTGGCGCGCATGCAGCGCGACCTGCGCGAGCGCCTGGAGCGCGAGCGCAGCATCGCAGCCGAAAACCTGCG
CATCCGCACCGCACTGGATAACGCTTCCACCGGCATGTACATCGCCGACCCGGACCTCACCATCATCTACACCAATAGTG
CGCTGCAAAACCTGCTGCACACCTACGCAGACGATATCCAGGCCTGTGCGCCCGCGTTCAATCGCACCGCCAACCTGGTC
GGCCAACCGGTCTCGCTGCTGGAAGTGGGCAACGCACAGGACGCGGAGATCTATCAGCGTCTGGACCGCCAGGGCGCTGC
CCAGCGCGAGGTGCAGTACCGCAGCACCTGCATCGCACAGAACGTTTCGGCAATTCGCGACGAGGCCGGCGCGCATCTGG
GCTTTGTCCGCGAGTGGCGCGACCGCACGGCCGAGGCGCGCGTGGAAATCGACGTTGCCGACGTGGTGCGTAGCGCCGCT
GCCGGCGATCTTTCCAAGCGCATCGACAGTACCGGGAAACAAGGCTTTTTCCTGCAACTGGCGCAACAGCTCAATGCCTT
GCTCGATGCCAACGCGGTCAGCATCGCCGAAGTGTCGCGCCTGCTGAGCGCGCTGGCCGACGGCGACCTGAGTGCGCGCA
TGCAGGGCCAATTCCATGGCGTTTTCGCCACGATGCGCGACGACGCCAATACCACCGCCGAGCAACTGGCGCTGGTGATC
GGGCGTATCCAGCAGGCCGCCGGCAGCATTCATACCGCCTCCAGCGAAATTGCCGCCGGCAACAACGACCTGTCGCAGCG
CACCGAACAACAAGCGGCCAATCTGGAAGAGACTGCCGCCTCGATGGAAGAGCTCACCTCCACCGTCAAACAGAATGCGG
AAAGCGCACGCCAGGCCAACCAGTTGGCGATCGGTGCGGCTGGTGTGGCTTCGCAGGGCGGCGCGGTGGTGGCGCAGGTG
GTCACCACCATGTCCGGCATCGAAGTCTCATCGAAAAAGATCGCCGAGATCATCAGCGTGATCGACGGCATCGCGTTCCA
GACCAACATCCTGGCGCTCAACGCCGCCGTGGAAGCGGCGCGCGCCGGCGAGCAGGGCCGCGGTTTCGCAGTGGTCGCCT
CCGAGGTGCGCACGCTGGCGCAGCGGTCGGCCGGTGCCGCGAAAGAGATCAAACATCTGATCGACGATTCGGTGAGCAAG
GTCGCCGAGGGCTCGCAGCTGGTCCATCAGGCCGGCACCACCATGGCCGATATCGTCGCCAGCGTGCAGCGCGTCACCGA
CATCATGGGCGAGATCGCTGCCGCGTCGCAGGACCAGTCGTCGGGTATCGAGCAGGTCAACCTCACCATCACCCAGATGG
ATGAGGCGACCCAGCAGAACGCCGCATTGGTGGAAGAAGCCACTGCCGCTGCGCGCACCATGGAGGACCAGGCCAGCCAG
CTGGCGCACGCAGTGTCGCGCTTTACCCTGGCCGATGCGCCGCAGGCGCAGGCTGCAATGCCTGTGGCCACAACGCCCGC
CGTGGTCGCCGTTGCCCGGGCAAGCAAGCCCAGCAGGCGTGCGCCGAGCGCTCGCAAGCCGGCAGTGAACGCGTCCGCGG
CCACCGCCGGCAACGACAGCCAGTGGCAGGACTTCTGA

Upstream 100 bases:

>100_bases
TTGGCGGCGACCGCAACTGGCCATGGCGGCCGCGCAACACATCGCCGAAGGCCGCCTGGACCAACCGATCCCGGTCGCCG
CAAAGCACAGCCGCAGCCTG

Downstream 100 bases:

>100_bases
GCAAGACCGGTGCGCGACGGCGGCCCGGATCTGGCGCCGTGACGCAGAGCGCTGTTTAGCGGCCCTGCGGCTCGGCCACA
TCGCCGCGACAGCTGTATAG

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 544

Protein sequence:

>545_residues
MAALARMQRDLRERLERERSIAAENLRIRTALDNASTGMYIADPDLTIIYTNSALQNLLHTYADDIQACAPAFNRTANLV
GQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQNVSAIRDEAGAHLGFVREWRDRTAEARVEIDVADVVRSAA
AGDLSKRIDSTGKQGFFLQLAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGQFHGVFATMRDDANTTAEQLALVI
GRIQQAAGSIHTASSEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAAGVASQGGAVVAQV
VTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSK
VAEGSQLVHQAGTTMADIVASVQRVTDIMGEIAAASQDQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQ
LAHAVSRFTLADAPQAQAAMPVATTPAVVAVARASKPSRRAPSARKPAVNASAATAGNDSQWQDF

Sequences:

>Translated_545_residues
MAALARMQRDLRERLERERSIAAENLRIRTALDNASTGMYIADPDLTIIYTNSALQNLLHTYADDIQACAPAFNRTANLV
GQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQNVSAIRDEAGAHLGFVREWRDRTAEARVEIDVADVVRSAA
AGDLSKRIDSTGKQGFFLQLAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGQFHGVFATMRDDANTTAEQLALVI
GRIQQAAGSIHTASSEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAAGVASQGGAVVAQV
VTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSK
VAEGSQLVHQAGTTMADIVASVQRVTDIMGEIAAASQDQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQ
LAHAVSRFTLADAPQAQAAMPVATTPAVVAVARASKPSRRAPSARKPAVNASAATAGNDSQWQDF
>Mature_544_residues
AALARMQRDLRERLERERSIAAENLRIRTALDNASTGMYIADPDLTIIYTNSALQNLLHTYADDIQACAPAFNRTANLVG
QPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQNVSAIRDEAGAHLGFVREWRDRTAEARVEIDVADVVRSAAA
GDLSKRIDSTGKQGFFLQLAQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGQFHGVFATMRDDANTTAEQLALVIG
RIQQAAGSIHTASSEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQANQLAIGAAGVASQGGAVVAQVV
TTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKV
AEGSQLVHQAGTTMADIVASVQRVTDIMGEIAAASQDQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQL
AHAVSRFTLADAPQAQAAMPVATTPAVVAVARASKPSRRAPSARKPAVNASAATAGNDSQWQDF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=59.1503267973856, Blast_Score=297, Evalue=1e-81,
Organism=Escherichia coli, GI2367378, Length=354, Percent_Identity=54.5197740112994, Blast_Score=295, Evalue=4e-81,
Organism=Escherichia coli, GI1788194, Length=272, Percent_Identity=58.8235294117647, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1787690, Length=255, Percent_Identity=61.9607843137255, Blast_Score=275, Evalue=7e-75,
Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=45.1612903225806, Blast_Score=203, Evalue=2e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 57498; Mature: 57366

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALARMQRDLRERLERERSIAAENLRIRTALDNASTGMYIADPDLTIIYTNSALQNLLH
CHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCEEEEEECHHHHHHHH
TYADDIQACAPAFNRTANLVGQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
NVSAIRDEAGAHLGFVREWRDRTAEARVEIDVADVVRSAAAGDLSKRIDSTGKQGFFLQL
HHHHHHHHHCCHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGQFHGVFATMRDDANTTAEQLALVI
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEEECCCCCHHHHHHHHHH
GRIQQAAGSIHTASSEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQAN
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAIGAAGVASQGGAVVAQVVTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAA
HHEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADIVA
HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVQRVTDIMGEIAAASQDQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQ
HHHHHHHHHHHHHHCCCCHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHAVSRFTLADAPQAQAAMPVATTPAVVAVARASKPSRRAPSARKPAVNASAATAGNDS
HHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QWQDF
CCCCC
>Mature Secondary Structure 
AALARMQRDLRERLERERSIAAENLRIRTALDNASTGMYIADPDLTIIYTNSALQNLLH
HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCEEEEEECHHHHHHHH
TYADDIQACAPAFNRTANLVGQPVSLLEVGNAQDAEIYQRLDRQGAAQREVQYRSTCIAQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
NVSAIRDEAGAHLGFVREWRDRTAEARVEIDVADVVRSAAAGDLSKRIDSTGKQGFFLQL
HHHHHHHHHCCHHHHHHHHHHCCCHHEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AQQLNALLDANAVSIAEVSRLLSALADGDLSARMQGQFHGVFATMRDDANTTAEQLALVI
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHCCCHHHEEEEECCCCCHHHHHHHHHH
GRIQQAAGSIHTASSEIAAGNNDLSQRTEQQAANLEETAASMEELTSTVKQNAESARQAN
HHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QLAIGAAGVASQGGAVVAQVVTTMSGIEVSSKKIAEIISVIDGIAFQTNILALNAAVEAA
HHEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
RAGEQGRGFAVVASEVRTLAQRSAGAAKEIKHLIDDSVSKVAEGSQLVHQAGTTMADIVA
HCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SVQRVTDIMGEIAAASQDQSSGIEQVNLTITQMDEATQQNAALVEEATAAARTMEDQASQ
HHHHHHHHHHHHHHCCCCHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAHAVSRFTLADAPQAQAAMPVATTPAVVAVARASKPSRRAPSARKPAVNASAATAGNDS
HHHHHHHHHHCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QWQDF
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]