| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is cheW1 [H]
Identifier: 78047491
GI number: 78047491
Start: 2190743
End: 2191225
Strand: Reverse
Name: cheW1 [H]
Synonym: XCV1935
Alternate gene names: 78047491
Gene position: 2191225-2190743 (Counterclockwise)
Preceding gene: 78047492
Following gene: 78047490
Centisome position: 42.31
GC content: 60.04
Gene sequence:
>483_bases ATGAACGATAAAAGCACTGCCACCGGCACAGGTGGTGAATTCCTCAGCTTCGCTTTGGGCGAAGAACACTACGGCGTGGA TATCCTGAAGGTGCAGGAAATCCGCGGCTACGATTCGGTCACGCGTCTGCCCGACGCGCCGGACTACATCAAGGGCGTGA TCAACCTGCGCGGCACCATCGTGCCGGTGATCGACCTGCGCCTGAAGCTGCGCCTGAAAGAAGCGCGCTACGACGCTTTC ACCGTGATGATCGTGCTCAACGTCGAGGACCGCGTGGTCGGCATCGTCGTGGACAGCGTGTCCGACGTGATTCCGCTCAA CGACGACCAGATCCGTCCTACCCCCGAATTCGGTGCGTCGGTCGACACTCGTTTCATCTCCGGTATCGGCACCCAGGACG ATCGCATGTTGATCCTGCTGGATATCGAAACCCTGCTGGACAGCACCGAGCTGGGTCAGCAGCTGGTGGAAGAAGCCGCC TGA
Upstream 100 bases:
>100_bases TGCCGCCTACCCCGCCGATGTTGCTAGGGCATCCCGCATCCGTCTCTGCTGCCGCAGTCCTGCCTCAACCCGACACTTAG CCGCAACGCCCGGAGTTTCC
Downstream 100 bases:
>100_bases TTCAAACGGCTGCGTTGCCTCGCCTGCGGTCGCCGGAGAGGTGTAGAGGAATGCAGGAGCCGCCATGTACGACAAGCGGC TACCAAACGACTGCCAGGCC
Product: chemotaxis signal transduction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MNDKSTATGTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTIVPVIDLRLKLRLKEARYDAF TVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGASVDTRFISGIGTQDDRMLILLDIETLLDSTELGQQLVEEAA
Sequences:
>Translated_160_residues MNDKSTATGTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTIVPVIDLRLKLRLKEARYDAF TVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGASVDTRFISGIGTQDDRMLILLDIETLLDSTELGQQLVEEAA >Mature_160_residues MNDKSTATGTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTIVPVIDLRLKLRLKEARYDAF TVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGASVDTRFISGIGTQDDRMLILLDIETLLDSTELGQQLVEEAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=157, Percent_Identity=55.4140127388535, Blast_Score=173, Evalue=6e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 17622; Mature: 17622
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDKSTATGTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTI CCCCCCCCCCCCHHEEEECCCCCCCEEEEEEEECCCCCCHHCCCCCHHHHHHHHHCCCEE VPVIDLRLKLRLKEARYDAFTVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGAS EEEEEEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCEECCCCCCCCCCCCCCCC VDTRFISGIGTQDDRMLILLDIETLLDSTELGQQLVEEAA CCHHHHHCCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MNDKSTATGTGGEFLSFALGEEHYGVDILKVQEIRGYDSVTRLPDAPDYIKGVINLRGTI CCCCCCCCCCCCHHEEEECCCCCCCEEEEEEEECCCCCCHHCCCCCHHHHHHHHHCCCEE VPVIDLRLKLRLKEARYDAFTVMIVLNVEDRVVGIVVDSVSDVIPLNDDQIRPTPEFGAS EEEEEEEEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCEECCCCCCCCCCCCCCCC VDTRFISGIGTQDDRMLILLDIETLLDSTELGQQLVEEAA CCHHHHHCCCCCCCCEEEEEEHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]