Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78047393

Identifier: 78047393

GI number: 78047393

Start: 2074569

End: 2074853

Strand: Reverse

Name: 78047393

Synonym: XCV1837

Alternate gene names: NA

Gene position: 2074853-2074569 (Counterclockwise)

Preceding gene: 78047394

Following gene: 78047392

Centisome position: 40.07

GC content: 64.91

Gene sequence:

>285_bases
ATGAACGTTGTCGTTCGACAGACCAGCGCCATGGCGATCGTCAGCCTGGTTGCGGGCATTCTCGGCTGGACGCTGATCCC
GTTCCTGGGCAGCATCTGCGCCATCATTACCGGGCATCTGGCCCGCGCGGAAATCCGCCGCAATCCCCAGGGTCTGGACG
GCGACGGCCTGGCCATCGGCGGCCTCATCATGGGCTGGCTGGCGGTGGCGCTCTGGGTGGTGGGAATCGCGTTTTTCCTG
CTGTTCTTTGGCGGCATGGCCTGGCTTGCGGCCGCCAACAGTTGA

Upstream 100 bases:

>100_bases
GCAACGACGTTTGGCCGCAAACGGCACGCCTTTTGCCCGGCGGCTCTGGGATAATCATGCGACGCCAGCCTTCGGCTGCC
CGCCCTTCAAGGAGTTCATG

Downstream 100 bases:

>100_bases
GCATGGCCACGCCCTCCTCCGCCCAGCGCTTCAACGACCGCGTGGCCGCCTACGTGCGCTACCGGCCCAGTTACCCGCCG
CAGCTGCTGCGTTGGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 94

Protein sequence:

>94_residues
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHLARAEIRRNPQGLDGDGLAIGGLIMGWLAVALWVVGIAFFL
LFFGGMAWLAAANS

Sequences:

>Translated_94_residues
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHLARAEIRRNPQGLDGDGLAIGGLIMGWLAVALWVVGIAFFL
LFFGGMAWLAAANS
>Mature_94_residues
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHLARAEIRRNPQGLDGDGLAIGGLIMGWLAVALWVVGIAFFL
LFFGGMAWLAAANS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9825; Mature: 9825

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHLARAEIRRNPQGLDGDGLAIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
GLIMGWLAVALWVVGIAFFLLFFGGMAWLAAANS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVVVRQTSAMAIVSLVAGILGWTLIPFLGSICAIITGHLARAEIRRNPQGLDGDGLAIG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
GLIMGWLAVALWVVGIAFFLLFFGGMAWLAAANS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA