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The map label for this gene is 78047276

Identifier: 78047276

GI number: 78047276

Start: 1938968

End: 1939360

Strand: Reverse

Name: 78047276

Synonym: XCV1720

Alternate gene names: NA

Gene position: 1939360-1938968 (Counterclockwise)

Preceding gene: 78047277

Following gene: 78047275

Centisome position: 37.45

GC content: 62.85

Gene sequence:

>393_bases
ATGAACCCACCACGCAAACTCTCCGTGTTGTGCGCCCCGTTGGCCGGCCTGATGCTGGCGGGCGCACTGACCATGCCCTC
GGCCTACGCTGCCGACGGCGCCGGCGTCTTCCTCACCGAATGCGGTGAATGCCACAGCGTCAAACCGGGCAAGAACAAGA
AAGGTCCGTCGCTGTTCGGCGTGGCAGGCCGCCCTGCCGGTACCGTCGCAGACTTCGGCGGTTATTCCGATGCGCTCAAG
AACAGCAAGTGGACCTGGACTCCGGCCCAGCTCAAGACCTATCTGTCGCAATCCTCGTCCAAGGCGCTGCCGGGCACCAA
GATGAAGTACGACGGCCTGGACGACCCGAAGGAGCTCGACGCACTGATCGCCTACCTCAACACTTTGAAGTAG

Upstream 100 bases:

>100_bases
TCTTCCGTGGCCCGCCGATCACCAATCCGCGCGATCTCGACAGCTTCACCCTGTCGGTCAATCTGGCCTTCTGATCCCTC
CCGCACCTGTACGGATCCAC

Downstream 100 bases:

>100_bases
GCGCGGCCACTGCGGCATGGCGCGTCGTCGCCCGAGGGGGCGGACGCATGGCGCGCCAATCGCAACGCGCGCGCATGCCC
GCGGCCCCGGTCGCCTGCCC

Product: putative cytochrome C precursor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MNPPRKLSVLCAPLAGLMLAGALTMPSAYAADGAGVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALK
NSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK

Sequences:

>Translated_130_residues
MNPPRKLSVLCAPLAGLMLAGALTMPSAYAADGAGVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALK
NSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK
>Mature_130_residues
MNPPRKLSVLCAPLAGLMLAGALTMPSAYAADGAGVFLTECGECHSVKPGKNKKGPSLFGVAGRPAGTVADFGGYSDALK
NSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELDALIAYLNTLK

Specific function: Unknown

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c family [H]

Homologues:

Organism=Homo sapiens, GI11128019, Length=95, Percent_Identity=40, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17539604, Length=104, Percent_Identity=39.4230769230769, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320796, Length=98, Percent_Identity=38.7755102040816, Blast_Score=70, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322508, Length=98, Percent_Identity=38.7755102040816, Blast_Score=65, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17137228, Length=107, Percent_Identity=40.1869158878505, Blast_Score=75, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17137204, Length=107, Percent_Identity=41.1214953271028, Blast_Score=73, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 13623; Mature: 13623

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPPRKLSVLCAPLAGLMLAGALTMPSAYAADGAGVFLTECGECHSVKPGKNKKGPSLFG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAGRPAGTVADFGGYSDALKNSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELD
ECCCCCCCHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHH
ALIAYLNTLK
HHHHHHHHCC
>Mature Secondary Structure
MNPPRKLSVLCAPLAGLMLAGALTMPSAYAADGAGVFLTECGECHSVKPGKNKKGPSLFG
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEE
VAGRPAGTVADFGGYSDALKNSKWTWTPAQLKTYLSQSSSKALPGTKMKYDGLDDPKELD
ECCCCCCCHHCCCCCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCCCHHHHH
ALIAYLNTLK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2823792; 8809072 [H]