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The map label for this gene is ccmC1 [H]

Identifier: 78047271

GI number: 78047271

Start: 1934341

End: 1935099

Strand: Reverse

Name: ccmC1 [H]

Synonym: XCV1715

Alternate gene names: 78047271

Gene position: 1935099-1934341 (Counterclockwise)

Preceding gene: 78047272

Following gene: 78047270

Centisome position: 37.37

GC content: 64.3

Gene sequence:

>759_bases
ATGGCCAAGTGGATTCCCTTGTGGCTGCATCAACTCAGCTCGCCACCGACGTTCTATCGTGTCGCCGGCAGCGTGCGCCC
GTGGGCGCTGGGGCTGGCCGCGCTGCTCGGCGCGGTCGCAGTCTACGGCGGCCTGGTACTGGCACCGCCGGATTACCAGC
AACACGATGCCTACCGCATCATCTTCATCCATGTGCCCAGCGCCTGGATGAGTCTTTTCATCTACGCGGCAATGGGCGTT
TCGGCGTTCATTGCGCTGGTGTGGCGCATCAAGCTGGCCGAAGTGGTCGCCATGGCCTCGGCACCGATCGGCGCAGCCTT
CACCTTCATCACCCTGTGCACCGGCGCGCTGTGGGGCAAGCCGATGTGGGGCACCTGGTGGACCTGGGATGCGCGGCTCA
CCTCCGAGTTGCTGCTGCTGTTTTTGTACCTGGGCGTGCTGGGCCTCTATTACGCCGTGGAAGACCGCCGCCAGGCAATG
CGCGCCGCCGGCTTGCTCGCACTGGTGGGGCTGGTGAATCTGCCCATCGTGCATTACTCGGTGGTGTGGTGGAACACGCT
GCACCAGGGTTCCACTGTGCGCCTGCTCGGCCCCTCCAAGATGAGCGCAGACATGCTGTGGCCGCTGCTGACCATGATGC
TGGCAACCAAGTGCTATTACGTTGCGAGCCTGTTCGGCCGCGTGCGGGTGGATTTGCTGGCGCTTGAAAGCGGCAAGGAC
TGGGTCCGCCGCATCGTGTTGACGGAGCGCAGCGCATGA

Upstream 100 bases:

>100_bases
CGCACCAGCAAAGTTTCCGACGGGCAGTTGCAGGTCAACGCCGGCGCCGCAGTGCAGGCGCTGGCGCCTCACGCCAAACA
CTCCAACTGACGGCACCGGC

Downstream 100 bases:

>100_bases
GCGCTTTCCTGGCGATGGGCGGCTACGGCCAATACGTGTGGACCGCTTATGCAGTATTCGTGCTGGTGCTGCTGGCCGAT
CTTGCAGCGCCCTGGCTGCG

Product: ABC transporter heme permease CcmC (c-type cytochrome biogenesis protein CcmC)

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAVYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGV
SAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYYAVEDRRQAM
RAAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVDLLALESGKD
WVRRIVLTERSA

Sequences:

>Translated_252_residues
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAVYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGV
SAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYYAVEDRRQAM
RAAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVDLLALESGKD
WVRRIVLTERSA
>Mature_251_residues
AKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAVYGGLVLAPPDYQQHDAYRIIFIHVPSAWMSLFIYAAMGVS
AFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGKPMWGTWWTWDARLTSELLLLFLYLGVLGLYYAVEDRRQAMR
AAGLLALVGLVNLPIVHYSVVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVDLLALESGKDW
VRRIVLTERSA

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=243, Percent_Identity=50.2057613168724, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 28115; Mature: 27984

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAVYGGLVLAPPDYQQHDAYRI
CCCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
IFIHVPSAWMSLFIYAAMGVSAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PMWGTWWTWDARLTSELLLLFLYLGVLGLYYAVEDRRQAMRAAGLLALVGLVNLPIVHYS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVDLLALESGKD
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHH
WVRRIVLTERSA
HHHHHHHHCCCC
>Mature Secondary Structure 
AKWIPLWLHQLSSPPTFYRVAGSVRPWALGLAALLGAVAVYGGLVLAPPDYQQHDAYRI
CCHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCEEE
IFIHVPSAWMSLFIYAAMGVSAFIALVWRIKLAEVVAMASAPIGAAFTFITLCTGALWGK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PMWGTWWTWDARLTSELLLLFLYLGVLGLYYAVEDRRQAMRAAGLLALVGLVNLPIVHYS
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
VVWWNTLHQGSTVRLLGPSKMSADMLWPLLTMMLATKCYYVASLFGRVRVDLLALESGKD
HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHH
WVRRIVLTERSA
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]