Click here to switch to the map view.

The map label for this gene is 78047259

Identifier: 78047259

GI number: 78047259

Start: 1920174

End: 1921364

Strand: Reverse

Name: 78047259

Synonym: XCV1703

Alternate gene names: NA

Gene position: 1921364-1920174 (Counterclockwise)

Preceding gene: 78047260

Following gene: 78047258

Centisome position: 37.1

GC content: 67.51

Gene sequence:

>1191_bases
ATGCCGCGTCGTATCCTCATCACCGGCGCCAGCATCGCCGGCAACACTGCCGCCTGGACACTCGCCCATCGCGGCTTCGA
TGTGACCGTGGTGGAACGCGCCACCCGGTTTCGCGATGGCGGCCAGAACATCGACGTACGTGGTGTCGGCCGTGAGGTGC
TGCAACGCATGGGCCTGGAACAGGCCGCGCTGGCCCAGGGAACCGGCGAAGAAGGCACCGCCTGGATCGACGCGCACGGC
CAGGCCGTCGCCACCTTCAAGACCGAAGACATCGATGGCGATGGCCCGACCGCCGAACTGGAGATCTTGCGCGGCGATCT
GGCCCGCCTGCTCTACGATGCCGCGCGCGGCCATGTGACGTACCGCTTCGGCGACCGCATCGCCAGCATCGAAGACGCTG
CCGGCAGCGATGCCGCAACCGTCACCTTCGAAAGCGGTTGCAGCGAACGCTTCGACGCGGTGATCGTCGCCGAAGGCGTG
GGCTCTTCGACGCGCGAACAGGTCTTCCCGGGAGAAAACGATCCGCGCTGGATGGATCTGACCATCGCCTACTTCACCAT
CCCGCGCAGCGCCGACGACGACCCGCTGTGGCGCTGGTACCACACCACCGGCGGGCGCAGCATCTCGTTGCGACCCGACC
GGCACGGCACCACGCGCGCCATGCTCTCGCTGCAGAAACCGCCCGAAGGCGAACAAGACTGGGACATCGACGCCCAGAAG
GCCTACCTGCACGAGGGCTTTGCCGACGCCGGGTGGCAGGCGGCGCGCGTGCTCGATGGCATGCATGGCACCGACGACTT
CTACTTCGATGCCCTGCGCCAGGTGCGCATGCAGCGTTGGCATAGCGGTCGCACCGTGCTTACCGGCGATGCGGCCTGGT
GCGCCACGCCACTGGCCGGGATCGGCGCCACCCTGGCAGTGACCGGCGCGTATGTTCTGGCCAACGAAATCGCCCAGGCC
GCCACGCTGGACGCGGCCTTCGCTGCCTACGCCACCGCCATGCGCCCGATGGTCGAGCAGGCCCAGGGCGTGCCGAAGAT
CGGCCCACGCCTGATGAACCCGCATAGCCGGCTCGGCATCCACCTGCTGCATGGCGCACTCAAACTCGCCAGCCAGCCAA
GCGTGCAGAACCTCGCTGCAAAGTGGATGACGCCGGCGATCAAGGCGCCGGATCTCTCGCGTTATCCCTAA

Upstream 100 bases:

>100_bases
AGCAGACCGTCGCGTTGATGCACCGGCTGATCGCGAACATGGAGCGTTACGGCCAGGGCGTGTAATATCACTCCTGATAT
TTCCTGCCAGGATGACAGCA

Downstream 100 bases:

>100_bases
GCGCCGTTGCAGGCGCCGGTAAGCCGCCGGCGGCAGCGTTGCAGGCAGGAACGACGAGTGTCTCGGCGCATTGAGCAGCC
CCACCAGCACCTGAACCGGC

Product: putative FAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPRRILITGASIAGNTAAWTLAHRGFDVTVVERATRFRDGGQNIDVRGVGREVLQRMGLEQAALAQGTGEEGTAWIDAHG
QAVATFKTEDIDGDGPTAELEILRGDLARLLYDAARGHVTYRFGDRIASIEDAAGSDAATVTFESGCSERFDAVIVAEGV
GSSTREQVFPGENDPRWMDLTIAYFTIPRSADDDPLWRWYHTTGGRSISLRPDRHGTTRAMLSLQKPPEGEQDWDIDAQK
AYLHEGFADAGWQAARVLDGMHGTDDFYFDALRQVRMQRWHSGRTVLTGDAAWCATPLAGIGATLAVTGAYVLANEIAQA
ATLDAAFAAYATAMRPMVEQAQGVPKIGPRLMNPHSRLGIHLLHGALKLASQPSVQNLAAKWMTPAIKAPDLSRYP

Sequences:

>Translated_396_residues
MPRRILITGASIAGNTAAWTLAHRGFDVTVVERATRFRDGGQNIDVRGVGREVLQRMGLEQAALAQGTGEEGTAWIDAHG
QAVATFKTEDIDGDGPTAELEILRGDLARLLYDAARGHVTYRFGDRIASIEDAAGSDAATVTFESGCSERFDAVIVAEGV
GSSTREQVFPGENDPRWMDLTIAYFTIPRSADDDPLWRWYHTTGGRSISLRPDRHGTTRAMLSLQKPPEGEQDWDIDAQK
AYLHEGFADAGWQAARVLDGMHGTDDFYFDALRQVRMQRWHSGRTVLTGDAAWCATPLAGIGATLAVTGAYVLANEIAQA
ATLDAAFAAYATAMRPMVEQAQGVPKIGPRLMNPHSRLGIHLLHGALKLASQPSVQNLAAKWMTPAIKAPDLSRYP
>Mature_395_residues
PRRILITGASIAGNTAAWTLAHRGFDVTVVERATRFRDGGQNIDVRGVGREVLQRMGLEQAALAQGTGEEGTAWIDAHGQ
AVATFKTEDIDGDGPTAELEILRGDLARLLYDAARGHVTYRFGDRIASIEDAAGSDAATVTFESGCSERFDAVIVAEGVG
SSTREQVFPGENDPRWMDLTIAYFTIPRSADDDPLWRWYHTTGGRSISLRPDRHGTTRAMLSLQKPPEGEQDWDIDAQKA
YLHEGFADAGWQAARVLDGMHGTDDFYFDALRQVRMQRWHSGRTVLTGDAAWCATPLAGIGATLAVTGAYVLANEIAQAA
TLDAAFAAYATAMRPMVEQAQGVPKIGPRLMNPHSRLGIHLLHGALKLASQPSVQNLAAKWMTPAIKAPDLSRYP

Specific function: Unknown

COG id: COG0654

COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: NA

Molecular weight: Translated: 42967; Mature: 42835

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRRILITGASIAGNTAAWTLAHRGFDVTVVERATRFRDGGQNIDVRGVGREVLQRMGLE
CCCEEEEECCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCCCEEEEECCHHHHHHHCCCC
QAALAQGTGEEGTAWIDAHGQAVATFKTEDIDGDGPTAELEILRGDLARLLYDAARGHVT
HHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
YRFGDRIASIEDAAGSDAATVTFESGCSERFDAVIVAEGVGSSTREQVFPGENDPRWMDL
EEECCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCEEEE
TIAYFTIPRSADDDPLWRWYHTTGGRSISLRPDRHGTTRAMLSLQKPPEGEQDWDIDAQK
EEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHH
AYLHEGFADAGWQAARVLDGMHGTDDFYFDALRQVRMQRWHSGRTVLTGDAAWCATPLAG
HHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCHHH
IGATLAVTGAYVLANEIAQAATLDAAFAAYATAMRPMVEQAQGVPKIGPRLMNPHSRLGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHH
HLLHGALKLASQPSVQNLAAKWMTPAIKAPDLSRYP
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRRILITGASIAGNTAAWTLAHRGFDVTVVERATRFRDGGQNIDVRGVGREVLQRMGLE
CCEEEEECCCCCCCCEEEEEEECCCEEEHHHHHHHHCCCCCEEEEECCHHHHHHHCCCC
QAALAQGTGEEGTAWIDAHGQAVATFKTEDIDGDGPTAELEILRGDLARLLYDAARGHVT
HHHHHCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEE
YRFGDRIASIEDAAGSDAATVTFESGCSERFDAVIVAEGVGSSTREQVFPGENDPRWMDL
EEECCCHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCHHHCCCCCCCCCEEEE
TIAYFTIPRSADDDPLWRWYHTTGGRSISLRPDRHGTTRAMLSLQKPPEGEQDWDIDAQK
EEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCHHHHEEECCCCCCCCCCCCCHHH
AYLHEGFADAGWQAARVLDGMHGTDDFYFDALRQVRMQRWHSGRTVLTGDAAWCATPLAG
HHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHCCHHH
IGATLAVTGAYVLANEIAQAATLDAAFAAYATAMRPMVEQAQGVPKIGPRLMNPHSRLGI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHH
HLLHGALKLASQPSVQNLAAKWMTPAIKAPDLSRYP
HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]