Click here to switch to the map view.

The map label for this gene is 78047256

Identifier: 78047256

GI number: 78047256

Start: 1915772

End: 1916572

Strand: Reverse

Name: 78047256

Synonym: XCV1700

Alternate gene names: NA

Gene position: 1916572-1915772 (Counterclockwise)

Preceding gene: 78047258

Following gene: 78047251

Centisome position: 37.01

GC content: 61.55

Gene sequence:

>801_bases
ATGAGCAACTCAAACAGCCCGCATGAAGCACGTGTCGCGGTATTGGTCGACTGCGACAACGTGCCGACCGACATCGTTGA
ACACGCCTTGCTCATGGTGGCGCAGTTCGGCCGGGTTGTGCTGCGCCGCGGGTATGGCAACCACAACACGCTCGCCAACA
AGTGGCAGGAGGTCCTGGTCCGCCAGGCATTCACCCCGTGCCTTCAATACCAATACGCCTCGGGCAAGAACACCGCCGAC
ATTGCCTTGGCGCTCGACGCTTTGGAGGCACTGTTCGACAGCCGGGCCGACACCTTCTGCCTGGTCACCAGCGACTCTGA
CTTCTCCTACCTCTGCCGCAAGCTCCGGGAGCGCGGGGCCACGGTGTTCATCGTCGGGGAACCGAAGACCCCGGATGCCC
TGCGCAACGCCTGCGACCAATTCTTCGAATGGGAAAGGCCAGCCAAAGAGCCTGTGCCCCATGAAACCCAGGGCATGGAT
CTGCCCGCAGTGAAGCCGGAAGTGACGAAGGATGAAGCGCCCCGCGTGGAAACCAAGCCACTGCCGAAACGACGTCCCCG
GTTCTTAGTCGAAGCCGTGACACTGCTGACCGGCGACACCTCCGAGGGCAAGGTGGGACTGTCGGCGCTGGGCCAATACC
TCAAACGCACTGACCCATCTTTCTCGCCTAACCTCTACGGCCACTCCGGTCTGCTCAACATGGTGAAAACCTATGACCTG
CTGACAACGCAGCGAGAGGAGACCGGCGGTTGGTCGGTCAGCATCTCGCACAAGCCAGAGGTTCTCGACCAGTCGGGATG
A

Upstream 100 bases:

>100_bases
TCGATCATAGCCTCCGTATCGGCCCGATTGCTAGCGCACGCTTGCCATGGACAAGTTGCTGACGCCATTGTCTGTCTGCA
TAAACTCGGACCTCACAGAC

Downstream 100 bases:

>100_bases
TCCGCACTGGATTGATAAACGCCGTGGGGCGACAACCTTACGTCACGGCATGTGAGCTACTCCACCGAGGTGAAAGGAAA
CCTGCACTTGAGGACGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MSNSNSPHEARVAVLVDCDNVPTDIVEHALLMVAQFGRVVLRRGYGNHNTLANKWQEVLVRQAFTPCLQYQYASGKNTAD
IALALDALEALFDSRADTFCLVTSDSDFSYLCRKLRERGATVFIVGEPKTPDALRNACDQFFEWERPAKEPVPHETQGMD
LPAVKPEVTKDEAPRVETKPLPKRRPRFLVEAVTLLTGDTSEGKVGLSALGQYLKRTDPSFSPNLYGHSGLLNMVKTYDL
LTTQREETGGWSVSISHKPEVLDQSG

Sequences:

>Translated_266_residues
MSNSNSPHEARVAVLVDCDNVPTDIVEHALLMVAQFGRVVLRRGYGNHNTLANKWQEVLVRQAFTPCLQYQYASGKNTAD
IALALDALEALFDSRADTFCLVTSDSDFSYLCRKLRERGATVFIVGEPKTPDALRNACDQFFEWERPAKEPVPHETQGMD
LPAVKPEVTKDEAPRVETKPLPKRRPRFLVEAVTLLTGDTSEGKVGLSALGQYLKRTDPSFSPNLYGHSGLLNMVKTYDL
LTTQREETGGWSVSISHKPEVLDQSG
>Mature_265_residues
SNSNSPHEARVAVLVDCDNVPTDIVEHALLMVAQFGRVVLRRGYGNHNTLANKWQEVLVRQAFTPCLQYQYASGKNTADI
ALALDALEALFDSRADTFCLVTSDSDFSYLCRKLRERGATVFIVGEPKTPDALRNACDQFFEWERPAKEPVPHETQGMDL
PAVKPEVTKDEAPRVETKPLPKRRPRFLVEAVTLLTGDTSEGKVGLSALGQYLKRTDPSFSPNLYGHSGLLNMVKTYDLL
TTQREETGGWSVSISHKPEVLDQSG

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29551; Mature: 29420

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSNSPHEARVAVLVDCDNVPTDIVEHALLMVAQFGRVVLRRGYGNHNTLANKWQEVLV
CCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RQAFTPCLQYQYASGKNTADIALALDALEALFDSRADTFCLVTSDSDFSYLCRKLRERGA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
TVFIVGEPKTPDALRNACDQFFEWERPAKEPVPHETQGMDLPAVKPEVTKDEAPRVETKP
EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPKRRPRFLVEAVTLLTGDTSEGKVGLSALGQYLKRTDPSFSPNLYGHSGLLNMVKTYDL
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
LTTQREETGGWSVSISHKPEVLDQSG
HHHCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SNSNSPHEARVAVLVDCDNVPTDIVEHALLMVAQFGRVVLRRGYGNHNTLANKWQEVLV
CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
RQAFTPCLQYQYASGKNTADIALALDALEALFDSRADTFCLVTSDSDFSYLCRKLRERGA
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
TVFIVGEPKTPDALRNACDQFFEWERPAKEPVPHETQGMDLPAVKPEVTKDEAPRVETKP
EEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
LPKRRPRFLVEAVTLLTGDTSEGKVGLSALGQYLKRTDPSFSPNLYGHSGLLNMVKTYDL
CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
LTTQREETGGWSVSISHKPEVLDQSG
HHHCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA