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The map label for this gene is 78046990

Identifier: 78046990

GI number: 78046990

Start: 1613021

End: 1614154

Strand: Reverse

Name: 78046990

Synonym: XCV1434

Alternate gene names: NA

Gene position: 1614154-1613021 (Counterclockwise)

Preceding gene: 78046991

Following gene: 78046989

Centisome position: 31.17

GC content: 65.52

Gene sequence:

>1134_bases
ATGTGTGCGCAGCTGCGCGATTCGTTCGCGACGCCAAGCGAACCCCACCCATGCGTGCGACGATCAAGCGGCCTGGTGCA
TCTGTTTGCCGGCAGCGTCCGTACTGGGTCACGACTACTCTATGGAGAATCACGCGTGCCGAGCACTGGCCTCGACCCTC
ACGCCGCAGCGCCGCAGCCCGCCACCGCACCACCGCGTGGCGGGCTGGCCGCACGCGTCGGCAGCCTGCGGCGCTGGGTG
GATTCGCAAACCGACGAGCCCCTGGACGAAGCGCGTGCCGATCGCATCGACTGGCTACGTGCGGTGCCTTTCATCGCCTT
GCACCTGGCCTGCCTGGCGGTGTTCTGGGTCGGTGCGTCCTGGTTTGCGGTGGGCATGGCGGTGGCGTTGTACGCGCTGC
GCATGTTCGCGCTCACCGGTTTTTACCACCGCTACTTCTCGCACCGCGCGTTCAAGACGTCGCGGGTGCTGCAATTCGTG
TTCGCCGCCATCGGGGCCACCTGCGTGCAGCGCGGGCCTTTGTGGTGGGCGGCGCATCATCGCAACCACCATCGACATAC
CGACACCGGCCGCGATCCGCATTCGCCGGCGCAGCACGGCTTCTGGTGGAGCCATACCGGCTGGTTCCTGACCCCGCGTA
ATTTCCGCACCGACTGGGAAGTGATTCCCGACCTGCGCCGCTTTGCCGAACTGCGTTTTCTGGACCGCTTCGACATCGTG
ATGCCGGTGCTGCTGGCGCTGGGCCTGTACCTGCTCGGCGACTGGCTGGCAGTGGCTGCGCCCGCGCTGAAAACCAGCGG
CGCGCAGTTGTTGGTGTGGGGCTTTGTGATCTCCACCGTGGCGTTGTTCCATGCCACCTTCACCATCAACTCGCTGGCGC
ATCGTTTCGGCAGCCGGCGGTTCGACACCCGCGACGACAGCCGCAACAACTGGCTGCTGGCATTGCTCACCTTCGGCGAA
GGCTGGCACAACAATCACCATTTCTTCCCAGGCTCGGCGCGCCAGGGATTGCGATGGTGGGAATACGACATGACCTGGTA
CGGACTCACCGCGATGTCGTGGGTGGGGCTGGTGTGGGACCTCAAGCCGATGCCGAAGCTGCTCACCCAGCGCGCCGAAC
GGGTGAAGCGATGA

Upstream 100 bases:

>100_bases
TGGCGCCCTGATCCAGCGCGCCTGACCTCGCCTGCGGCCACTTCGCAGGCGGGGCTCTCCAAGACAGCCTCATCCGCGCC
GGTATTCTGTGACGCGGGCA

Downstream 100 bases:

>100_bases
GCGATGGCAGAATTGCCGTGGTCGGCAGCGGAATCGCCGGCCTCGGTGCAGCGTGGCTGTTGTCGCGGCGCTGCGAGGTG
ACCTTGTTCGAGGCCGCCGA

Product: fatty-acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Acyl-CoA Desaturase; Fatty Acid Desaturase Subfamily; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase; Fatty Acid Desaturase Domain Protein; Fatty Acid Desaturase Family Protein; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Delta-9 Acyl-Lipid Desaturase; Delta 9 Acyl-Lipid Desaturase; Membrane-Bound Fatty Acid Desaturase; Long Chain Acyl-CoA Desaturase; Delta-9 Fatty Acid Desaturase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Fatty Acid-CoA Desaturase; Acyl-Coa Desaturase; Delta-9-Acyl-Lipid Fatty Acid Desaturase; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Eucaryotic Stearoyl-CoA 9-Desaturase; Fatty Acid Desaturase Protein

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MCAQLRDSFATPSEPHPCVRRSSGLVHLFAGSVRTGSRLLYGESRVPSTGLDPHAAAPQPATAPPRGGLAARVGSLRRWV
DSQTDEPLDEARADRIDWLRAVPFIALHLACLAVFWVGASWFAVGMAVALYALRMFALTGFYHRYFSHRAFKTSRVLQFV
FAAIGATCVQRGPLWWAAHHRNHHRHTDTGRDPHSPAQHGFWWSHTGWFLTPRNFRTDWEVIPDLRRFAELRFLDRFDIV
MPVLLALGLYLLGDWLAVAAPALKTSGAQLLVWGFVISTVALFHATFTINSLAHRFGSRRFDTRDDSRNNWLLALLTFGE
GWHNNHHFFPGSARQGLRWWEYDMTWYGLTAMSWVGLVWDLKPMPKLLTQRAERVKR

Sequences:

>Translated_377_residues
MCAQLRDSFATPSEPHPCVRRSSGLVHLFAGSVRTGSRLLYGESRVPSTGLDPHAAAPQPATAPPRGGLAARVGSLRRWV
DSQTDEPLDEARADRIDWLRAVPFIALHLACLAVFWVGASWFAVGMAVALYALRMFALTGFYHRYFSHRAFKTSRVLQFV
FAAIGATCVQRGPLWWAAHHRNHHRHTDTGRDPHSPAQHGFWWSHTGWFLTPRNFRTDWEVIPDLRRFAELRFLDRFDIV
MPVLLALGLYLLGDWLAVAAPALKTSGAQLLVWGFVISTVALFHATFTINSLAHRFGSRRFDTRDDSRNNWLLALLTFGE
GWHNNHHFFPGSARQGLRWWEYDMTWYGLTAMSWVGLVWDLKPMPKLLTQRAERVKR
>Mature_377_residues
MCAQLRDSFATPSEPHPCVRRSSGLVHLFAGSVRTGSRLLYGESRVPSTGLDPHAAAPQPATAPPRGGLAARVGSLRRWV
DSQTDEPLDEARADRIDWLRAVPFIALHLACLAVFWVGASWFAVGMAVALYALRMFALTGFYHRYFSHRAFKTSRVLQFV
FAAIGATCVQRGPLWWAAHHRNHHRHTDTGRDPHSPAQHGFWWSHTGWFLTPRNFRTDWEVIPDLRRFAELRFLDRFDIV
MPVLLALGLYLLGDWLAVAAPALKTSGAQLLVWGFVISTVALFHATFTINSLAHRFGSRRFDTRDDSRNNWLLALLTFGE
GWHNNHHFFPGSARQGLRWWEYDMTWYGLTAMSWVGLVWDLKPMPKLLTQRAERVKR

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI53759151, Length=245, Percent_Identity=29.3877551020408, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI148596961, Length=289, Percent_Identity=28.0276816608997, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI17561774, Length=318, Percent_Identity=28.3018867924528, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17561776, Length=294, Percent_Identity=27.2108843537415, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17540878, Length=258, Percent_Identity=27.5193798449612, Blast_Score=94, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6321383, Length=257, Percent_Identity=35.0194552529183, Blast_Score=151, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646303, Length=339, Percent_Identity=26.8436578171091, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646299, Length=339, Percent_Identity=26.8436578171091, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646305, Length=339, Percent_Identity=26.8436578171091, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646301, Length=339, Percent_Identity=26.8436578171091, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24646297, Length=339, Percent_Identity=26.8436578171091, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24662393, Length=344, Percent_Identity=25.5813953488372, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24646295, Length=305, Percent_Identity=28.1967213114754, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24646500, Length=302, Percent_Identity=25.1655629139073, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21358571, Length=248, Percent_Identity=27.4193548387097, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI21358573, Length=248, Percent_Identity=29.4354838709677, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42962; Mature: 42962

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCAQLRDSFATPSEPHPCVRRSSGLVHLFAGSVRTGSRLLYGESRVPSTGLDPHAAAPQP
CCCCHHHCCCCCCCCCCHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC
ATAPPRGGLAARVGSLRRWVDSQTDEPLDEARADRIDWLRAVPFIALHLACLAVFWVGAS
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFAVGMAVALYALRMFALTGFYHRYFSHRAFKTSRVLQFVFAAIGATCVQRGPLWWAAHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
RNHHRHTDTGRDPHSPAQHGFWWSHTGWFLTPRNFRTDWEVIPDLRRFAELRFLDRFDIV
CCCCCCCCCCCCCCCCHHCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MPVLLALGLYLLGDWLAVAAPALKTSGAQLLVWGFVISTVALFHATFTINSLAHRFGSRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FDTRDDSRNNWLLALLTFGEGWHNNHHFFPGSARQGLRWWEYDMTWYGLTAMSWVGLVWD
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHHHHHC
LKPMPKLLTQRAERVKR
CCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MCAQLRDSFATPSEPHPCVRRSSGLVHLFAGSVRTGSRLLYGESRVPSTGLDPHAAAPQP
CCCCHHHCCCCCCCCCCHHHHCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCC
ATAPPRGGLAARVGSLRRWVDSQTDEPLDEARADRIDWLRAVPFIALHLACLAVFWVGAS
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WFAVGMAVALYALRMFALTGFYHRYFSHRAFKTSRVLQFVFAAIGATCVQRGPLWWAAHH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCC
RNHHRHTDTGRDPHSPAQHGFWWSHTGWFLTPRNFRTDWEVIPDLRRFAELRFLDRFDIV
CCCCCCCCCCCCCCCCHHCCEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
MPVLLALGLYLLGDWLAVAAPALKTSGAQLLVWGFVISTVALFHATFTINSLAHRFGSRR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
FDTRDDSRNNWLLALLTFGEGWHNNHHFFPGSARQGLRWWEYDMTWYGLTAMSWVGLVWD
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHCCCEEEEECCHHHHHHHHHHHHHHHC
LKPMPKLLTQRAERVKR
CCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA