| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046988
Identifier: 78046988
GI number: 78046988
Start: 1610890
End: 1611777
Strand: Reverse
Name: 78046988
Synonym: XCV1432
Alternate gene names: NA
Gene position: 1611777-1610890 (Counterclockwise)
Preceding gene: 78046989
Following gene: 78046987
Centisome position: 31.12
GC content: 65.65
Gene sequence:
>888_bases GTGATGCAGCTGCTGCGCGACGCCCACCACGACGCGGTGCCGTTGCCCCCTACCGAGGGCAGCGGCGCCGGTCGCGTGGC GAGGCCATTGCGCAGCGCGATCTACACCGGCTGGGTGCGGCACCGGCGCTTCATGCCCAAGGCGCTGCATTTCCGCTATC GCCTGTTCCTGATGTATCTGGATCTGTCCGAGCTGGATCAGGTGTTCGCACGACGCTGGTTGTGGTCGGTGGGGCGCGCC AATCTGGCGCAGTTCCGGCGCAGCGACTATCTGGGCGATGCGAGCATTCCGCTGGACCAGGCGGTGCGCGACTGCGTGCA CACGCACACCGGCGAGCGCCCCGAGGGCGCGATCCGGCTGCTGACGCATCTGCGCTATTTCGGTCACGTGTTCAACCCGG TCAGCTTCTACTATTGCTTCGATCGCCACGACAGCCTGCGCTGGATCGTGGCAGAAATCACCAACACGCCCTGGCAGCAA CGCCATACCTACGTGCTGCCGGTGGCGCAGGCGCGCACGCATCGCGATGTGCATGCGTGGCGCTTCGACAAGCGCTTCCA CGTTTCGCCGTTCATGGGCATGCAGCAGCGCTACGACTGGCGCTTCAGCGTGCCGGATGCGCAGTTGCGTGTGCATATGG ATGTGCTGGACGTCGTTGGCGACGATGCCGGCGGTGCCATCGACAACAGCAGTACGCGCCGCTTCGACGCCACCTTGGTG CTGCAACGTCAACCGCTCACCGCGCGCAACCTGGCGTGCACGTTGCTGGCTTATCCGTTGATGACGGTGTGGGTGGTGAT CGCCATCCACTGGCAGGCCTTGCGCCTGTGGCTGCGCGGCAACCCAGTCCACGACCACCCTCACCCGCCTGTGCGAGAAC CCCGATGA
Upstream 100 bases:
>100_bases TGCAGCACACCTGGTTTGCCGGCGCCGCGTGGGGCTTCGGTTTCCACGAAGACGGCCTGCGCAGCGGCGTGGACGTCGCG CATGGCCTGGGAGTGCACTG
Downstream 100 bases:
>100_bases ACGCCACGTCCCTGCCCGATCACGCTGCGCCGCGCGCGGCCTCCTGGACGGACCGTCTGCTGCGCAAGCGCCTGCTGGCC ACGCTTGGGCAACTGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MMQLLRDAHHDAVPLPPTEGSGAGRVARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRA NLAQFRRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQ RHTYVLPVAQARTHRDVHAWRFDKRFHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDVVGDDAGGAIDNSSTRRFDATLV LQRQPLTARNLACTLLAYPLMTVWVVIAIHWQALRLWLRGNPVHDHPHPPVREPR
Sequences:
>Translated_295_residues MMQLLRDAHHDAVPLPPTEGSGAGRVARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRA NLAQFRRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQ RHTYVLPVAQARTHRDVHAWRFDKRFHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDVVGDDAGGAIDNSSTRRFDATLV LQRQPLTARNLACTLLAYPLMTVWVVIAIHWQALRLWLRGNPVHDHPHPPVREPR >Mature_295_residues MMQLLRDAHHDAVPLPPTEGSGAGRVARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYLDLSELDQVFARRWLWSVGRA NLAQFRRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRLLTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQ RHTYVLPVAQARTHRDVHAWRFDKRFHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDVVGDDAGGAIDNSSTRRFDATLV LQRQPLTARNLACTLLAYPLMTVWVVIAIHWQALRLWLRGNPVHDHPHPPVREPR
Specific function: Unknown
COG id: COG3496
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34594; Mature: 34594
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMQLLRDAHHDAVPLPPTEGSGAGRVARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYL CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DLSELDQVFARRWLWSVGRANLAQFRRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRL CHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH LTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAW HHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHCCCEEEEEHHHHCCCCHHHH RFDKRFHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDVVGDDAGGAIDNSSTRRFDATLV CCCCEECCCHHHCHHHHCCCEECCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEEE LQRQPLTARNLACTLLAYPLMTVWVVIAIHWQALRLWLRGNPVHDHPHPPVREPR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMQLLRDAHHDAVPLPPTEGSGAGRVARPLRSAIYTGWVRHRRFMPKALHFRYRLFLMYL CHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH DLSELDQVFARRWLWSVGRANLAQFRRSDYLGDASIPLDQAVRDCVHTHTGERPEGAIRL CHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHH LTHLRYFGHVFNPVSFYYCFDRHDSLRWIVAEITNTPWQQRHTYVLPVAQARTHRDVHAW HHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCCCCHHHCCCEEEEEHHHHCCCCHHHH RFDKRFHVSPFMGMQQRYDWRFSVPDAQLRVHMDVLDVVGDDAGGAIDNSSTRRFDATLV CCCCEECCCHHHCHHHHCCCEECCCCHHEEEHHHHHHHHCCCCCCCCCCCCCCEEEEEEE LQRQPLTARNLACTLLAYPLMTVWVVIAIHWQALRLWLRGNPVHDHPHPPVREPR EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA