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The map label for this gene is 78046960

Identifier: 78046960

GI number: 78046960

Start: 1586724

End: 1587980

Strand: Reverse

Name: 78046960

Synonym: XCV1404

Alternate gene names: NA

Gene position: 1587980-1586724 (Counterclockwise)

Preceding gene: 78046961

Following gene: 78046959

Centisome position: 30.67

GC content: 70.72

Gene sequence:

>1257_bases
ATGCAGCCCTCCTCTTTTGCAGACCTCACCCGCGCGGCGCAACGCCAGCAACCCGGCGCGATCAACGCGCTGGCCCAGGC
GCTGGTGCGTGCCGGCCAACCGGAAGAAGCGCTTGTCTGGTATTTGCGCAGCGCGGCCGCCGGCGATGCGCTGGCGCAGG
TCGAAGCCGGGCGCATGCGGGCCTATGGCGTCGGTTGCGAGGTGGACGTCGGTCAGGCGCGTGCGTACTGGGAGCTGGCC
GAGCGGCAGGGCGCTGCAGCAGCACGCTATTTGCTGGCGACCCTGGCTGTGGGAGAGCAGCCGCTGACCCTGGCCGGCAC
TGCGCAGGATCGACTGCAGTCGGCAGCCAATGCCGACTACCCGCCAGCACTACGCGCCATCGCCATCCAGCACGGACGTG
TGGCGCATCCGGAGCGGCAACGGCAGTGCGTCGCCTTGCTGGAACGCGCGGCGGCCGGCGGCGATGCCGTGTCGGCCGCC
CTGTTGGCCGAGCGCCTGCTGCGCGGCGAAGGCGTGCCGCCCCAGCCCGATGCCGCTGCACAGCTCTTGCAGCAGTTGCA
GCCCCTGGGCATGACCGCGCTACCGCCGGTGGACGTCGCGCCGCCGGACCCCGCAGACGACACCGCCGGTCACCGCATCG
CATTCGCGCCGCGTGTTGGCCCGGTGCGACGCCACACAGCCCCACGCATCGAAGAATATGCCGCAGTCCTGTCGGCCGAC
GAATGCCGCTTGCTCATGCTGCTGGCGCGACCGCATCTGCGTGCCTCGAAGGTGATCGATCCCAACGATGCCAGCACCGG
GCGCGCGCCGGTCCGCACCAGCCACGGCGCGACATTGGACCCCATCATCGAAGACTTCGCCGCGCGTGCCGCACAGTCGC
GGTTGGCGGCCTGCGCGCAGCTCCCGCTCGCCCACGCAGAACCACTCTCGGTGTTGTGTTACGCACCGGGCGAGCAGTAC
CGCGCGCACCGTGACTACCTGCCGCCCGGAACGATCGCCGCCGACCGCCCCACCGCCGGCAACCGCCAGCGCACCGTCTG
CGTCTATCTCAACGACGTCGGCGCCGGTGGCGAGACCGAATTCCCGGTCGCCGGCGTTCGCGTGCGGCCACGTCCCGGCA
CACTGGTCTGCTTCGACAACCTGCATGCCGATGGCCGCCCGGACGCCGATTCGCTGCACGCCGGCCTGCCGGTCACGGCA
GGCAGCAAATGGTTGGGGACGCTGTGGTTCCGCCAGCAACGCTACCGGGATTGGTGA

Upstream 100 bases:

>100_bases
TCTCCTTCGCACACTCTCGTACACTGCAGTTCCGAGCGCGCCGCCCACCTCCACCTGACGACCGCTCGCCACGTGGTGTT
GGCCACTTTAGGATGCGCGC

Downstream 100 bases:

>100_bases
ACAGATTCATACACACCCCCCTGCCGACGTGGTTTAAAATGTTGCAGCGCGACGTGATCGGACAGGATCTGCAAACGTCG
CGTTTTTTGTTTCCCACGGC

Product: hypothetical protein

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit; Oxidoreductase 2OG-Fe(II) Oxygenase Family; Oxygenase; Procollagen-Proline 2-Oxoglutarate-4-Dioxygenase; Response Regulator Receiver Domain-Containing Protein; 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Subunit Alpha; 2OG-Fe(II) Oxygenase Superfamily Protein; 2OG-Fe(II) Oxygenase Family Protein; Procollagen-Proline 2-Oxoglutarate-4- Dioxygenase; Prolyl 4-Hydroxylase

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MQPSSFADLTRAAQRQQPGAINALAQALVRAGQPEEALVWYLRSAAAGDALAQVEAGRMRAYGVGCEVDVGQARAYWELA
ERQGAAAARYLLATLAVGEQPLTLAGTAQDRLQSAANADYPPALRAIAIQHGRVAHPERQRQCVALLERAAAGGDAVSAA
LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPPVDVAPPDPADDTAGHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD
ECRLLMLLARPHLRASKVIDPNDASTGRAPVRTSHGATLDPIIEDFAARAAQSRLAACAQLPLAHAEPLSVLCYAPGEQY
RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGETEFPVAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA
GSKWLGTLWFRQQRYRDW

Sequences:

>Translated_418_residues
MQPSSFADLTRAAQRQQPGAINALAQALVRAGQPEEALVWYLRSAAAGDALAQVEAGRMRAYGVGCEVDVGQARAYWELA
ERQGAAAARYLLATLAVGEQPLTLAGTAQDRLQSAANADYPPALRAIAIQHGRVAHPERQRQCVALLERAAAGGDAVSAA
LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPPVDVAPPDPADDTAGHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD
ECRLLMLLARPHLRASKVIDPNDASTGRAPVRTSHGATLDPIIEDFAARAAQSRLAACAQLPLAHAEPLSVLCYAPGEQY
RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGETEFPVAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA
GSKWLGTLWFRQQRYRDW
>Mature_418_residues
MQPSSFADLTRAAQRQQPGAINALAQALVRAGQPEEALVWYLRSAAAGDALAQVEAGRMRAYGVGCEVDVGQARAYWELA
ERQGAAAARYLLATLAVGEQPLTLAGTAQDRLQSAANADYPPALRAIAIQHGRVAHPERQRQCVALLERAAAGGDAVSAA
LLAERLLRGEGVPPQPDAAAQLLQQLQPLGMTALPPVDVAPPDPADDTAGHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD
ECRLLMLLARPHLRASKVIDPNDASTGRAPVRTSHGATLDPIIEDFAARAAQSRLAACAQLPLAHAEPLSVLCYAPGEQY
RAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGETEFPVAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTA
GSKWLGTLWFRQQRYRDW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI63252886, Length=261, Percent_Identity=30.6513409961686, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI217272849, Length=261, Percent_Identity=29.8850574712644, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI63252888, Length=261, Percent_Identity=29.8850574712644, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI63252893, Length=250, Percent_Identity=30.8, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI63252891, Length=250, Percent_Identity=30.8, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI217272861, Length=250, Percent_Identity=30.8, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4758868, Length=255, Percent_Identity=30.5882352941176, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI217272863, Length=255, Percent_Identity=30.5882352941176, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI33589818, Length=203, Percent_Identity=32.0197044334975, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI217272851, Length=261, Percent_Identity=27.9693486590038, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI193209068, Length=147, Percent_Identity=31.9727891156463, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI193209070, Length=148, Percent_Identity=31.7567567567568, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17552840, Length=202, Percent_Identity=26.7326732673267, Blast_Score=71, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17541712, Length=186, Percent_Identity=28.494623655914, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24651418, Length=205, Percent_Identity=32.6829268292683, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI24651407, Length=212, Percent_Identity=32.0754716981132, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24651424, Length=196, Percent_Identity=31.6326530612245, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI221460681, Length=193, Percent_Identity=32.6424870466321, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281361323, Length=145, Percent_Identity=33.1034482758621, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24651477, Length=189, Percent_Identity=33.3333333333333, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI116008130, Length=152, Percent_Identity=33.5526315789474, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI116008537, Length=152, Percent_Identity=33.5526315789474, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI116008434, Length=193, Percent_Identity=29.5336787564767, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI78706702, Length=145, Percent_Identity=31.7241379310345, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI221512818, Length=116, Percent_Identity=33.6206896551724, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24651430, Length=180, Percent_Identity=29.4444444444444, Blast_Score=79, Evalue=5e-15,
Organism=Drosophila melanogaster, GI21358233, Length=186, Percent_Identity=27.4193548387097, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24651420, Length=187, Percent_Identity=29.9465240641711, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI21358309, Length=202, Percent_Identity=32.6732673267327, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24651416, Length=205, Percent_Identity=32.1951219512195, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI116008128, Length=165, Percent_Identity=31.5151515151515, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116008432, Length=165, Percent_Identity=31.5151515151515, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44589; Mature: 44589

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSSFADLTRAAQRQQPGAINALAQALVRAGQPEEALVWYLRSAAAGDALAQVEAGRMR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCEE
AYGVGCEVDVGQARAYWELAERQGAAAARYLLATLAVGEQPLTLAGTAQDRLQSAANADY
EECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC
PPALRAIAIQHGRVAHPERQRQCVALLERAAAGGDAVSAALLAERLLRGEGVPPQPDAAA
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
QLLQQLQPLGMTALPPVDVAPPDPADDTAGHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCC
ECRLLMLLARPHLRASKVIDPNDASTGRAPVRTSHGATLDPIIEDFAARAAQSRLAACAQ
CHHEEHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LPLAHAEPLSVLCYAPGEQYRAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGETE
CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
FPVAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTAGSKWLGTLWFRQQRYRDW
CCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQPSSFADLTRAAQRQQPGAINALAQALVRAGQPEEALVWYLRSAAAGDALAQVEAGRMR
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCEE
AYGVGCEVDVGQARAYWELAERQGAAAARYLLATLAVGEQPLTLAGTAQDRLQSAANADY
EECCCCEEECCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCC
PPALRAIAIQHGRVAHPERQRQCVALLERAAAGGDAVSAALLAERLLRGEGVPPQPDAAA
CHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
QLLQQLQPLGMTALPPVDVAPPDPADDTAGHRIAFAPRVGPVRRHTAPRIEEYAAVLSAD
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHCCC
ECRLLMLLARPHLRASKVIDPNDASTGRAPVRTSHGATLDPIIEDFAARAAQSRLAACAQ
CHHEEHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LPLAHAEPLSVLCYAPGEQYRAHRDYLPPGTIAADRPTAGNRQRTVCVYLNDVGAGGETE
CCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC
FPVAGVRVRPRPGTLVCFDNLHADGRPDADSLHAGLPVTAGSKWLGTLWFRQQRYRDW
CCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA