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The map label for this gene is 78046824

Identifier: 78046824

GI number: 78046824

Start: 1425221

End: 1426090

Strand: Reverse

Name: 78046824

Synonym: XCV1268

Alternate gene names: NA

Gene position: 1426090-1425221 (Counterclockwise)

Preceding gene: 78046826

Following gene: 78046823

Centisome position: 27.54

GC content: 63.1

Gene sequence:

>870_bases
ATGAAAGAGAAGCCGATCGGTTCGTTACCCGGCATTCCCGTCGTTCTCGTCGCAGGCGCCGGCCTTGTCGGTACGTCTTG
GGTTGTATTGACGATGATGGCCGACAACAGCGTCACGCTGGGCGCGTTCATCGCCGCGGTACTGGTCGCGGCGGCGTGCA
TTTTCATGCTGGCCGGGCTGTACACGCTGGAGCCCAACCAGGCCGCGGTACTGAGCCTGTTCGGCAAGTACGTCGGCACC
GTCAAGGACGCCGGCCTGCGCTGGAATGTGCCGTTCTACGCCAAGCGTCGCGTCAGCCAGCGCGTACGCAATTTCGAAAG
CGGGCGACTCAAGGTCAACGAGCTGGATGGCAGTCCGATCGAAATCGCTGCGGTGATCGTATGGCAGGTGCTCGATGCCT
CCGAAGCGGTCTACAACGTCGACGACTACGAAAGCTTCGTGCATATCCAGTCCGAAGCGGCGCTGCGTGCGATGGCGACC
AGCTATCCGTACGACCAGCACGAAGACGGCCAGATCTCGCTGCGCAGCCATCCGGCCGAAATCAGCGAGCAACTCAAGCG
GCATCTGGACGAGCGCCTGACCCAGGCCGGCGTGGACGTGATCGAGGCGCGCATCAGCCACCTCGCCTACGCGCCGGAAA
TCGCCCAGGCCATGCTGCAGCGCCAGCAGGCCAATGCGGTGATTGCCGCACGCTCGCGCATCGTTGCCGGCGCAGTGGGG
ATGGTCGAAATGGCGCTGTCGGAGCTGCACAAGAATGGCGTGGTGCAGCTGGACGAAGAGCGCAAGGCGCATATGGTCAG
CAACCTGCTTACCGTGTTGTGTTCCGATCGCGGGACCCAACCGGTGGTCAACGCCGGCTCGCTGTATTGA

Upstream 100 bases:

>100_bases
CCGCCATTCTAACGGTTGCCCACTGCCACGCCGACGAACGGCTGTTGTTTAACTGATATCACATTGATATCTTCTTACCA
TTCCACAAGGACTCGCGCTC

Downstream 100 bases:

>100_bases
GGGCTGCCGATAAAACACCTGCGCTCACTGCCGCCCGGGCGCAGCCGCGGTTCGGCATCGGCATGCGCCACTCGTACACT
GCGCTTGTGGGCGCGCCCTC

Product: integral membrane protease subunit

Products: NA

Alternate protein names: Integral Membrane Protein; SPFH Domain/Band 7 Family Protein; SPFH Domain-Containing Protein/Band 7 Family Protein; Somatin-Like Protein; Band 7 Family Protein; SPFH Domain / Band 7 Family Protein; SPFH Domain-Containing Protein; Integral Membrane Protease Subunit; SPFH/Band 7 Domain-Containing Protein; Transmembrane Protein; HFLK Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Membrane Protease Subunits Stomatin/Prohibitin Homologs; Band 7 Family Membrane Protein; Membrane Protease Subunit Stomatin/Prohibitin

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKEKPIGSLPGIPVVLVAGAGLVGTSWVVLTMMADNSVTLGAFIAAVLVAAACIFMLAGLYTLEPNQAAVLSLFGKYVGT
VKDAGLRWNVPFYAKRRVSQRVRNFESGRLKVNELDGSPIEIAAVIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMAT
SYPYDQHEDGQISLRSHPAEISEQLKRHLDERLTQAGVDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVG
MVEMALSELHKNGVVQLDEERKAHMVSNLLTVLCSDRGTQPVVNAGSLY

Sequences:

>Translated_289_residues
MKEKPIGSLPGIPVVLVAGAGLVGTSWVVLTMMADNSVTLGAFIAAVLVAAACIFMLAGLYTLEPNQAAVLSLFGKYVGT
VKDAGLRWNVPFYAKRRVSQRVRNFESGRLKVNELDGSPIEIAAVIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMAT
SYPYDQHEDGQISLRSHPAEISEQLKRHLDERLTQAGVDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVG
MVEMALSELHKNGVVQLDEERKAHMVSNLLTVLCSDRGTQPVVNAGSLY
>Mature_289_residues
MKEKPIGSLPGIPVVLVAGAGLVGTSWVVLTMMADNSVTLGAFIAAVLVAAACIFMLAGLYTLEPNQAAVLSLFGKYVGT
VKDAGLRWNVPFYAKRRVSQRVRNFESGRLKVNELDGSPIEIAAVIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMAT
SYPYDQHEDGQISLRSHPAEISEQLKRHLDERLTQAGVDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVG
MVEMALSELHKNGVVQLDEERKAHMVSNLLTVLCSDRGTQPVVNAGSLY

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31325; Mature: 31325

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKPIGSLPGIPVVLVAGAGLVGTSWVVLTMMADNSVTLGAFIAAVLVAAACIFMLAGL
CCCCCCCCCCCCCEEEEECCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
YTLEPNQAAVLSLFGKYVGTVKDAGLRWNVPFYAKRRVSQRVRNFESGRLKVNELDGSPI
EEECCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCH
EIAAVIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMATSYPYDQHEDGQISLRSHPAE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHH
ISEQLKRHLDERLTQAGVDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVEMALSELHKNGVVQLDEERKAHMVSNLLTVLCSDRGTQPVVNAGSLY
HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEKPIGSLPGIPVVLVAGAGLVGTSWVVLTMMADNSVTLGAFIAAVLVAAACIFMLAGL
CCCCCCCCCCCCCEEEEECCCCHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
YTLEPNQAAVLSLFGKYVGTVKDAGLRWNVPFYAKRRVSQRVRNFESGRLKVNELDGSPI
EEECCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCH
EIAAVIVWQVLDASEAVYNVDDYESFVHIQSEAALRAMATSYPYDQHEDGQISLRSHPAE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHH
ISEQLKRHLDERLTQAGVDVIEARISHLAYAPEIAQAMLQRQQANAVIAARSRIVAGAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVEMALSELHKNGVVQLDEERKAHMVSNLLTVLCSDRGTQPVVNAGSLY
HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA