| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is 78046822
Identifier: 78046822
GI number: 78046822
Start: 1424601
End: 1424783
Strand: Reverse
Name: 78046822
Synonym: XCV1266
Alternate gene names: NA
Gene position: 1424783-1424601 (Counterclockwise)
Preceding gene: 78046823
Following gene: 78046821
Centisome position: 27.51
GC content: 57.38
Gene sequence:
>183_bases ATGAGCGAAAAAAAAGCCTACCCGCTGCGTATCAACGCCGATGTGTTGGCCGCCGTGCAGCGCTGGGCCGACGACGAATT GCGCAGCCTCAATGCGCAGATCGAATACGTGCTGCGCGATGCGTTACGCAAGGCTGGCCGGCTACCGAAACCGCAGGGCG AAAAAGAACAATCCGAAAATTGA
Upstream 100 bases:
>100_bases GCATCTATGCCGTGGTGATCGGCATGCTCATCGGCGTCAACGCGTTGATCGTGTCGATGGTGATGCACCTGCGCCGTCAC GGCGGCCGCAGAGACGGCAA
Downstream 100 bases:
>100_bases TCACGCGCCGTCGATCATCCAGACGCGACTGCGCACCGGTGTAGCGGTTCGCCCATCTGGGTCGGTGCGGGTCACAGCGC CTGGCCGGACTGGCAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 60; Mature: 59
Protein sequence:
>60_residues MSEKKAYPLRINADVLAAVQRWADDELRSLNAQIEYVLRDALRKAGRLPKPQGEKEQSEN
Sequences:
>Translated_60_residues MSEKKAYPLRINADVLAAVQRWADDELRSLNAQIEYVLRDALRKAGRLPKPQGEKEQSEN >Mature_59_residues SEKKAYPLRINADVLAAVQRWADDELRSLNAQIEYVLRDALRKAGRLPKPQGEKEQSEN
Specific function: Unknown
COG id: COG4877
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6881; Mature: 6750
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEKKAYPLRINADVLAAVQRWADDELRSLNAQIEYVLRDALRKAGRLPKPQGEKEQSEN CCCCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure SEKKAYPLRINADVLAAVQRWADDELRSLNAQIEYVLRDALRKAGRLPKPQGEKEQSEN CCCCCCCEEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA